Analysis of interatomic Contacts of Structural Units in PDB entry:
9QEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QEJ entry

There are 3 chains in PDB entry 9QEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 1038
B
 LEU 166ALA 876
C
 SER 22LYS 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are107 helices in PDB entry 9QEJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
15 28Right-handed alpha
Helix 3
AA3
A
34 43Right-handed alpha
Helix 4
AA4
A
49 67Right-handed alpha
Helix 5
AA5
A
84 94Right-handed alpha
Helix 6
AA6
A
94 102Right-handed alpha
Helix 7
AA7
A
103 120Right-handed alpha
Helix 8
AA8
A
127 137Right-handed alpha
Helix 9
AA9
A
141 161Right-handed alpha
Helix 10
AB1
A
163 168Right-handed alpha
Helix 11
AB2
A
170 175Right-handed alpha
Helix 12
AB3
A
177 189Right-handed alpha
Helix 13
AB4
A
193 212Right-handed alpha
Helix 14
AB5
A
221 238Right-handed alpha
Helix 15
AB6
A
242 247Right-handed alpha
Helix 16
AB7
A
251 254Right-handed 310
Helix 17
AB8
A
255 275Right-handed alpha
Helix 18
AB9
A
282 284Right-handed 310
Helix 19
AC1
A
285 292Right-handed alpha
Helix 20
AC2
A
295 314Right-handed alpha
Helix 21
AC3
A
318 333Right-handed alpha
Helix 22
AC4
A
335 342Right-handed alpha
Helix 23
AC5
A
345 351Right-handed alpha
Helix 24
AC6
A
361 371Right-handed alpha
Helix 25
AC7
A
371 380Right-handed alpha
Helix 26
AC8
A
389 404Right-handed alpha
Helix 27
AC9
A
407 420Right-handed alpha
Helix 28
AD1
A
425 439Right-handed alpha
Helix 29
AD2
A
439 444Right-handed alpha
Helix 30
AD3
A
445 450Right-handed 310
Helix 31
AD4
A
451 462Right-handed alpha
Helix 32
AD5
A
463 466Right-handed 310
Helix 33
AD6
A
469 483Right-handed alpha
Helix 34
AD7
A
491 508Right-handed alpha
Helix 35
AD8
A
510 526Right-handed alpha
Helix 36
AD9
A
527 528Right-handed 310
Helix 37
AE1
A
529 534Right-handed 310
Helix 38
AE2
A
535 537Right-handed 310
Helix 39
AE3
A
538 554Right-handed alpha
Helix 40
AE4
A
555 567Right-handed alpha
Helix 41
AE5
A
569 575Right-handed 310
Helix 42
AE6
A
576 594Right-handed alpha
Helix 43
AE7
A
600 621Right-handed alpha
Helix 44
AE8
A
626 645Right-handed alpha
Helix 45
AE9
A
652 663Right-handed alpha
Helix 46
AF1
A
669 674Right-handed alpha
Helix 47
AF2
A
674 685Right-handed alpha
Helix 48
AF3
A
692 702Right-handed alpha
Helix 49
AF4
A
712 728Right-handed alpha
Helix 50
AF5
A
731 749Right-handed alpha
Helix 51
AF6
A
757 766Right-handed alpha
Helix 52
AF7
A
775 791Right-handed alpha
Helix 53
AF8
A
793 804Right-handed alpha
Helix 54
AF9
A
812 825Right-handed alpha
Helix 55
AG1
A
826 828Right-handed 310
Helix 56
AG2
A
830 845Right-handed alpha
Helix 57
AG3
A
851 855Right-handed 310
Helix 58
AG4
A
860 884Right-handed alpha
Helix 59
AG5
A
911 924Right-handed alpha
Helix 60
AG6
A
928 932Right-handed 310
Helix 61
AG7
A
958 972Right-handed alpha
Helix 62
AG8
A
973 981Right-handed alpha
Helix 63
AG9
A
985 1014Right-handed alpha
Helix 64
AH1
B
167 182Right-handed alpha
Helix 65
AH2
B
187 202Right-handed alpha
Helix 66
AH3
B
206 211Right-handed alpha
Helix 67
AH4
B
212 226Right-handed alpha
Helix 68
AH5
B
230 248Right-handed alpha
Helix 69
AH6
B
250 255Right-handed 310
Helix 70
AH7
B
259 270Right-handed alpha
Helix 71
AH8
B
272 303Right-handed alpha
Helix 72
AH9
B
314 327Right-handed alpha
Helix 73
AI1
B
345 360Right-handed alpha
Helix 74
AI2
B
363 377Right-handed alpha
Helix 75
AI3
B
379 394Right-handed alpha
Helix 76
AI4
B
398 419Right-handed alpha
Helix 77
AI5
B
421 439Right-handed alpha
Helix 78
AI6
B
448 463Right-handed alpha
Helix 79
AI7
B
466 489Right-handed alpha
Helix 80
AI8
B
499 516Right-handed alpha
Helix 81
AI9
B
516 521Right-handed alpha
Helix 82
AJ1
B
525 535Right-handed alpha
Helix 83
AJ2
B
540 542Right-handed 310
Helix 84
AJ3
B
543 565Right-handed alpha
Helix 85
AJ4
B
570 592Right-handed alpha
Helix 86
AJ5
B
597 618Right-handed alpha
Helix 87
AJ6
B
622 640Right-handed alpha
Helix 88
AJ7
B
643 651Right-handed alpha
Helix 89
AJ8
B
653 659Right-handed alpha
Helix 90
AJ9
B
663 681Right-handed alpha
Helix 91
AK1
B
685 687Right-handed 310
Helix 92
AK2
B
688 699Right-handed alpha
Helix 93
AK3
B
708 725Right-handed alpha
Helix 94
AK4
B
728 730Right-handed 310
Helix 95
AK5
B
731 745Right-handed alpha
Helix 96
AK6
B
751 778Right-handed alpha
Helix 97
AK7
B
784 792Right-handed 310
Helix 98
AK8
B
793 806Right-handed alpha
Helix 99
AK9
B
812 827Right-handed alpha
Helix 100
AL1
B
831 839Right-handed alpha
Helix 101
AL2
B
840 852Right-handed alpha
Helix 102
AL3
B
855 874Right-handed alpha
Helix 103
AL4
C
27 37Right-handed alpha
Helix 104
AL5
C
46 58Right-handed alpha
Helix 105
AL6
C
61 63Right-handed 310
Helix 106
AL7
C
64 79Right-handed alpha
Helix 107
AL8
C
106 118Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9QEJ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 83first strand
Strand 2
C
93 95anti-parallel
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