Analysis of interatomic Contacts of Structural Units in PDB entry:
9QHR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QHR entry

There are 4 chains in PDB entry 9QHR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 223LYS 339
B
 ALA 224LYS 339
C
 GLY 223LYS 339
D
 GLY 223LYS 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9QHR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
227 241Right-handed alpha
Helix 2
AA2
A
252 256Right-handed 310
Helix 3
AA3
A
260 265Right-handed alpha
Helix 4
AA4
A
265 271Right-handed alpha
Helix 5
AA5
A
276 286Right-handed alpha
Helix 6
AA6
A
291 311Right-handed alpha
Helix 7
AA7
A
316 338Right-handed alpha
Helix 8
AA8
B
227 242Right-handed alpha
Helix 9
AA9
B
252 256Right-handed 310
Helix 10
AB1
B
264 271Right-handed alpha
Helix 11
AB2
B
276 286Right-handed alpha
Helix 12
AB3
B
291 310Right-handed alpha
Helix 13
AB4
B
316 337Right-handed alpha
Helix 14
AB5
C
227 242Right-handed alpha
Helix 15
AB6
C
252 256Right-handed 310
Helix 16
AB7
C
260 265Right-handed alpha
Helix 17
AB8
C
266 271Right-handed alpha
Helix 18
AB9
C
276 286Right-handed alpha
Helix 19
AC1
C
291 311Right-handed alpha
Helix 20
AC2
C
316 338Right-handed alpha
Helix 21
AC3
D
227 241Right-handed alpha
Helix 22
AC4
D
252 256Right-handed 310
Helix 23
AC5
D
264 271Right-handed alpha
Helix 24
AC6
D
276 286Right-handed alpha
Helix 25
AC7
D
291 310Right-handed alpha
Helix 26
AC8
D
316 338Right-handed alpha
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There are no sheets in PDB entry 9QHR
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il