Analysis of interatomic Contacts of Structural Units in PDB entry:
9QHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QHV entry

There are 4 chains in PDB entry 9QHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 31VAL 295
B
 ARG 31VAL 295
C
 VAL 2GLY 263
D
 VAL 2GLY 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 9QHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 46Right-handed alpha
Helix 2
AA2
A
46 65Right-handed alpha
Helix 3
AA3
A
69 92Right-handed alpha
Helix 4
AA4
A
94 126Right-handed alpha
Helix 5
AA5
A
128 133Right-handed alpha
Helix 6
AA6
A
137 164Right-handed alpha
Helix 7
AA7
A
173 175Right-handed 310
Helix 8
AA8
A
176 202Right-handed alpha
Helix 9
AA9
A
204 220Right-handed alpha
Helix 10
AB1
A
225 229Right-handed 310
Helix 11
AB2
A
236 242Right-handed alpha
Helix 12
AB3
A
244 257Right-handed alpha
Helix 13
AB4
A
262 288Right-handed alpha
Helix 14
AB5
A
290 295Right-handed alpha
Helix 15
AB6
B
32 46Right-handed alpha
Helix 16
AB7
B
46 65Right-handed alpha
Helix 17
AB8
B
69 92Right-handed alpha
Helix 18
AB9
B
94 126Right-handed alpha
Helix 19
AC1
B
128 133Right-handed alpha
Helix 20
AC2
B
137 164Right-handed alpha
Helix 21
AC3
B
173 175Right-handed 310
Helix 22
AC4
B
176 202Right-handed alpha
Helix 23
AC5
B
204 220Right-handed alpha
Helix 24
AC6
B
225 229Right-handed 310
Helix 25
AC7
B
236 242Right-handed alpha
Helix 26
AC8
B
244 257Right-handed alpha
Helix 27
AC9
B
262 288Right-handed alpha
Helix 28
AD1
B
290 295Right-handed alpha
Helix 29
AD2
C
22 24Right-handed 310
Helix 30
AD3
C
25 30Right-handed alpha
Helix 31
AD4
C
70 79Right-handed alpha
Helix 32
AD5
C
100 104Right-handed 310
Helix 33
AD6
C
110 112Right-handed 310
Helix 34
AD7
C
113 122Right-handed alpha
Helix 35
AD8
C
125 136Right-handed alpha
Helix 36
AD9
C
156 168Right-handed alpha
Helix 37
AE1
C
177 183Right-handed 310
Helix 38
AE2
C
184 202Right-handed alpha
Helix 39
AE3
C
211 219Right-handed alpha
Helix 40
AE4
C
235 244Right-handed alpha
Helix 41
AE5
C
245 263Right-handed alpha
Helix 42
AE6
D
22 24Right-handed 310
Helix 43
AE7
D
25 30Right-handed alpha
Helix 44
AE8
D
70 79Right-handed alpha
Helix 45
AE9
D
100 104Right-handed 310
Helix 46
AF1
D
110 112Right-handed 310
Helix 47
AF2
D
113 122Right-handed alpha
Helix 48
AF3
D
125 136Right-handed alpha
Helix 49
AF4
D
156 168Right-handed alpha
Helix 50
AF5
D
177 183Right-handed 310
Helix 51
AF6
D
184 202Right-handed alpha
Helix 52
AF7
D
211 219Right-handed alpha
Helix 53
AF8
D
235 244Right-handed alpha
Helix 54
AF9
D
245 263Right-handed alpha
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There are 6 sheets in PDB entry 9QHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 51first strand
Strand 2
C
3 14anti-parallel
Strand 3
C
54 55anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 51first strand
Strand 2
C
3 14anti-parallel
Strand 3
C
86 92anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
174 176first strand
Strand 2
C
204 208parallel
Strand 3
C
59 64parallel
Strand 4
C
221 226parallel
Strand 5
C
229 234anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 51first strand
Strand 2
D
3 14anti-parallel
Strand 3
D
54 55anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 51first strand
Strand 2
D
3 14anti-parallel
Strand 3
D
86 92anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
174 176first strand
Strand 2
D
204 208parallel
Strand 3
D
59 64parallel
Strand 4
D
221 226parallel
Strand 5
D
229 234anti-parallel
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