Analysis of interatomic Contacts of Structural Units in PDB entry:
9QKX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QKX entry

There is 1 chain in PDB entry 9QKX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1TRP 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9QKX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 22Right-handed alpha
Helix 2
AA2
A
33 47Right-handed alpha
Helix 3
AA3
A
52 60Right-handed alpha
Helix 4
AA4
A
64 78Right-handed alpha
Helix 5
AA5
A
89 100Right-handed alpha
Helix 6
AA6
A
113 127Right-handed alpha
Helix 7
AA7
A
138 149Right-handed alpha
Helix 8
AA8
A
160 175Right-handed alpha
Helix 9
AA9
A
185 196Right-handed alpha
Helix 10
AB1
A
207 219Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9QKX.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
25 29parallel
Strand 3
A
83 86parallel
Strand 4
A
103 107parallel
Strand 5
A
132 136parallel
Strand 6
A
152 156parallel
Strand 7
A
179 183parallel
Strand 8
A
199 203parallel
Strand 9
A
2 8parallel
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