Analysis of interatomic Contacts of Structural Units in PDB entry:
9QL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QL0 entry

There are 2 chains in PDB entry 9QL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 5VAL 322
B
 HIS 5VAL 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9QL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 42Right-handed alpha
Helix 2
AA2
A
54 64Right-handed alpha
Helix 3
AA3
A
71 75Right-handed 310
Helix 4
AA4
A
89 99Right-handed alpha
Helix 5
AA5
A
108 124Right-handed alpha
Helix 6
AA6
A
136 144Right-handed alpha
Helix 7
AA7
A
158 164Right-handed alpha
Helix 8
AA8
A
182 197Right-handed alpha
Helix 9
AA9
A
209 226Right-handed alpha
Helix 10
AB1
A
237 250Right-handed alpha
Helix 11
AB2
A
259 263Right-handed 310
Helix 12
AB3
A
264 268Right-handed 310
Helix 13
AB4
A
283 297Right-handed alpha
Helix 14
AB5
A
317 321Right-handed 310
Helix 15
AB6
B
24 42Right-handed alpha
Helix 16
AB7
B
54 65Right-handed alpha
Helix 17
AB8
B
71 75Right-handed 310
Helix 18
AB9
B
89 99Right-handed alpha
Helix 19
AC1
B
108 124Right-handed alpha
Helix 20
AC2
B
136 144Right-handed alpha
Helix 21
AC3
B
158 164Right-handed alpha
Helix 22
AC4
B
182 197Right-handed alpha
Helix 23
AC5
B
209 224Right-handed alpha
Helix 24
AC6
B
237 250Right-handed alpha
Helix 25
AC7
B
259 263Right-handed 310
Helix 26
AC8
B
264 269Right-handed 310
Helix 27
AC9
B
283 297Right-handed alpha
Helix 28
AD1
B
317 321Right-handed 310
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There are 7 sheets in PDB entry 9QL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 257first strand
Strand 2
A
228 232parallel
Strand 3
A
273 278parallel
Strand 4
A
13 17parallel
Strand 5
A
299 304parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
45 48parallel
Strand 3
A
80 83parallel
Strand 4
A
102 105parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 156first strand
Strand 2
A
127 131parallel
Strand 3
A
173 177parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 314first strand
Strand 2
B
312 314anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
253 257first strand
Strand 2
B
228 232parallel
Strand 3
B
273 278parallel
Strand 4
B
13 17parallel
Strand 5
B
299 304parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 69first strand
Strand 2
B
45 48parallel
Strand 3
B
80 83parallel
Strand 4
B
102 105parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 156first strand
Strand 2
B
127 131parallel
Strand 3
B
173 177parallel
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