Analysis of interatomic Contacts of Structural Units in PDB entry:
9QLV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9QLV entry

There are 8 chains in PDB entry 9QLV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
P	VAL 18	PRO 94
Q	VAL 18	PRO 94
R	VAL 18	PRO 94
S	VAL 18	PRO 94
A	PHE 183	LEU 992
B	PHE 183	LEU 992
C	PHE 183	LEU 992
D	PHE 183	LEU 992

There are104 helices in PDB entry 9QLV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	P	33	40	Right-handed alpha
Helix 2	AA2	P	40	45	Right-handed alpha
Helix 3	AA3	P	70	76	Right-handed alpha
Helix 4	AA4	P	80	85	Right-handed 310
Helix 5	AA5	Q	34	47	Right-handed alpha
Helix 6	AA6	Q	70	76	Right-handed alpha
Helix 7	AA7	R	34	47	Right-handed alpha
Helix 8	AA8	R	70	76	Right-handed alpha
Helix 9	AA9	S	34	47	Right-handed alpha
Helix 10	AB1	S	70	76	Right-handed alpha
Helix 11	AB2	S	79	83	Right-handed 310
Helix 12	AB3	A	188	201	Right-handed alpha
Helix 13	AB4	A	219	232	Right-handed alpha
Helix 14	AB5	A	245	250	Right-handed alpha
Helix 15	AB6	A	254	270	Right-handed alpha
Helix 16	AB7	A	281	288	Right-handed alpha
Helix 17	AB8	A	301	307	Right-handed alpha
Helix 18	AB9	A	310	314	Right-handed 310
Helix 19	AC1	A	326	333	Right-handed alpha
Helix 20	AC2	A	345	358	Right-handed alpha
Helix 21	AC3	A	364	366	Right-handed 310
Helix 22	AC4	A	367	379	Right-handed alpha
Helix 23	AC5	A	381	391	Right-handed alpha
Helix 24	AC6	A	396	408	Right-handed alpha
Helix 25	AC7	A	414	424	Right-handed alpha
Helix 26	AC8	A	426	439	Right-handed alpha
Helix 27	AC9	A	444	452	Right-handed alpha
Helix 28	AD1	A	458	469	Right-handed alpha
Helix 29	AD2	A	476	479	Right-handed 310
Helix 30	AD3	A	485	499	Right-handed alpha
Helix 31	AD4	A	500	504	Right-handed 310
Helix 32	AD5	A	509	520	Right-handed alpha
Helix 33	AD6	A	543	549	Right-handed alpha
Helix 34	AD7	A	664	670	Right-handed 310
Helix 35	AD8	A	841	851	Right-handed alpha
Helix 36	AD9	A	896	900	Right-handed 310
Helix 37	AE1	B	188	201	Right-handed alpha
Helix 38	AE2	B	219	232	Right-handed alpha
Helix 39	AE3	B	245	251	Right-handed alpha
Helix 40	AE4	B	254	270	Right-handed alpha
Helix 41	AE5	B	281	288	Right-handed alpha
Helix 42	AE6	B	301	307	Right-handed alpha
Helix 43	AE7	B	326	333	Right-handed alpha
Helix 44	AE8	B	345	358	Right-handed alpha
Helix 45	AE9	B	364	366	Right-handed 310
Helix 46	AF1	B	367	379	Right-handed alpha
Helix 47	AF2	B	381	392	Right-handed alpha
Helix 48	AF3	B	396	408	Right-handed alpha
Helix 49	AF4	B	414	424	Right-handed alpha
Helix 50	AF5	B	426	439	Right-handed alpha
Helix 51	AF6	B	444	453	Right-handed alpha
Helix 52	AF7	B	458	469	Right-handed alpha
Helix 53	AF8	B	485	499	Right-handed alpha
Helix 54	AF9	B	509	519	Right-handed alpha
Helix 55	AG1	B	543	549	Right-handed alpha
Helix 56	AG2	B	664	670	Right-handed 310
Helix 57	AG3	B	776	782	Right-handed alpha
Helix 58	AG4	B	842	849	Right-handed alpha
Helix 59	AG5	C	188	201	Right-handed alpha
Helix 60	AG6	C	219	231	Right-handed alpha
Helix 61	AG7	C	245	251	Right-handed alpha
Helix 62	AG8	C	254	270	Right-handed alpha
Helix 63	AG9	C	281	288	Right-handed alpha
Helix 64	AH1	C	310	314	Right-handed 310
Helix 65	AH2	C	326	333	Right-handed alpha
Helix 66	AH3	C	345	358	Right-handed alpha
Helix 67	AH4	C	364	366	Right-handed 310
Helix 68	AH5	C	367	379	Right-handed alpha
Helix 69	AH6	C	381	391	Right-handed alpha
Helix 70	AH7	C	396	408	Right-handed alpha
Helix 71	AH8	C	414	424	Right-handed alpha
Helix 72	AH9	C	426	440	Right-handed alpha
Helix 73	AI1	C	444	452	Right-handed alpha
Helix 74	AI2	C	458	469	Right-handed alpha
Helix 75	AI3	C	476	479	Right-handed 310
Helix 76	AI4	C	485	499	Right-handed alpha
Helix 77	AI5	C	499	504	Right-handed alpha
Helix 78	AI6	C	509	518	Right-handed alpha
Helix 79	AI7	C	544	549	Right-handed alpha
Helix 80	AI8	C	664	670	Right-handed 310
Helix 81	AI9	C	779	783	Right-handed 310
Helix 82	AJ1	C	841	851	Right-handed alpha
Helix 83	AJ2	C	918	922	Right-handed 310
Helix 84	AJ3	D	188	201	Right-handed alpha
Helix 85	AJ4	D	219	232	Right-handed alpha
Helix 86	AJ5	D	245	250	Right-handed alpha
Helix 87	AJ6	D	254	270	Right-handed alpha
Helix 88	AJ7	D	281	288	Right-handed alpha
Helix 89	AJ8	D	326	333	Right-handed alpha
Helix 90	AJ9	D	345	358	Right-handed alpha
Helix 91	AK1	D	367	379	Right-handed alpha
Helix 92	AK2	D	381	392	Right-handed alpha
Helix 93	AK3	D	396	402	Right-handed alpha
Helix 94	AK4	D	403	408	Right-handed alpha
Helix 95	AK5	D	414	424	Right-handed alpha
Helix 96	AK6	D	426	439	Right-handed alpha
Helix 97	AK7	D	444	452	Right-handed alpha
Helix 98	AK8	D	458	469	Right-handed alpha
Helix 99	AK9	D	485	499	Right-handed alpha
Helix 100	AL1	D	509	519	Right-handed alpha
Helix 101	AL2	D	543	549	Right-handed alpha
Helix 102	AL3	D	664	670	Right-handed 310
Helix 103	AL4	D	779	783	Right-handed 310
Helix 104	AL5	D	843	848	Right-handed alpha

There are 28 sheets in PDB entry 9QLV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	52	58	first strand
Strand 2	P	63	68	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	23	29	first strand
Strand 2	Q	62	68	anti-parallel
Strand 3	Q	52	58	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	52	58	first strand
Strand 2	R	63	68	anti-parallel
Strand 3	R	23	28	anti-parallel
Strand 4	R	91	93	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	24	28	first strand
Strand 2	S	63	68	anti-parallel
Strand 3	S	52	56	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	241	first strand
Strand 2	A	293	299	parallel
Strand 3	A	319	324	parallel
Strand 4	A	208	213	parallel
Strand 5	A	337	340	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	482	483	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	530	532	first strand
Strand 2	A	556	558	parallel
Strand 3	A	583	586	parallel
Strand 4	A	605	607	parallel
Strand 5	A	628	630	parallel
Strand 6	A	651	653	parallel
Strand 7	A	675	677	parallel
Strand 8	A	698	700	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	721	first strand
Strand 2	A	742	744	parallel
Strand 3	A	764	767	parallel
Strand 4	A	789	791	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	831	833	first strand
Strand 2	A	857	860	parallel
Strand 3	A	947	950	anti-parallel
Strand 4	A	890	893	anti-parallel
Strand 5	A	987	989	anti-parallel
Strand 6	A	871	873	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	877	880	first strand
Strand 2	A	971	974	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	912	915	first strand
Strand 2	A	918	924	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	241	first strand
Strand 2	B	292	296	parallel
Strand 3	B	319	324	parallel
Strand 4	B	208	213	parallel
Strand 5	B	337	340	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	472	475	first strand
Strand 2	B	481	484	anti-parallel

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There are 12 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	532	first strand
Strand 2	B	554	558	parallel
Strand 3	B	583	586	parallel
Strand 4	B	605	607	parallel
Strand 5	B	628	630	parallel
Strand 6	B	651	653	parallel
Strand 7	B	675	677	parallel
Strand 8	B	698	701	parallel
Strand 9	B	719	722	parallel
Strand 10	B	742	745	parallel
Strand 11	B	764	767	parallel
Strand 12	B	788	790	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	855	857	first strand
Strand 2	B	946	952	anti-parallel
Strand 3	B	891	894	anti-parallel
Strand 4	B	984	990	anti-parallel
Strand 5	B	869	873	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	878	880	first strand
Strand 2	B	971	973	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	911	912	first strand
Strand 2	B	924	925	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	241	first strand
Strand 2	C	292	299	parallel
Strand 3	C	319	324	parallel
Strand 4	C	208	213	parallel
Strand 5	C	338	340	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	482	483	anti-parallel

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There are 12 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	530	532	first strand
Strand 2	C	555	558	parallel
Strand 3	C	583	586	parallel
Strand 4	C	605	607	parallel
Strand 5	C	628	630	parallel
Strand 6	C	651	653	parallel
Strand 7	C	675	677	parallel
Strand 8	C	698	702	parallel
Strand 9	C	719	723	parallel
Strand 10	C	743	746	parallel
Strand 11	C	765	768	parallel
Strand 12	C	790	792	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	809	811	first strand
Strand 2	C	831	833	parallel
Strand 3	C	857	860	parallel
Strand 4	C	947	949	anti-parallel
Strand 5	C	891	893	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	871	873	first strand
Strand 2	C	987	989	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	877	878	first strand
Strand 2	C	973	974	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	237	241	first strand
Strand 2	D	292	299	parallel
Strand 3	D	319	324	parallel
Strand 4	D	208	213	parallel
Strand 5	D	337	340	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	475	first strand
Strand 2	D	481	483	anti-parallel

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There are 10 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	506	507	first strand
Strand 2	D	528	532	parallel
Strand 3	D	554	558	parallel
Strand 4	D	583	586	parallel
Strand 5	D	605	607	parallel
Strand 6	D	628	630	parallel
Strand 7	D	651	653	parallel
Strand 8	D	675	677	parallel
Strand 9	D	698	701	parallel
Strand 10	D	718	722	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	857	860	first strand
Strand 2	D	946	950	anti-parallel
Strand 3	D	893	894	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	913	915	first strand
Strand 2	D	971	973	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9QLV

Analysis of interatomic Contacts of Structural Units in PDB entry:
9QLV