Analysis of interatomic Contacts of Structural Units in PDB entry:
9QO2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9QO2 entry

There are 14 chains in PDB entry 9QO2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLN 35	ALA 443
C	GLN 52	SER 407
D	ALA 23	GLN 403
E	LYS 230	ILE 333
F	THR 216	ASP 314
G	ASN 10	THR 223
H	SER 12	ASN 209
I	ASP 18	LYS 750
J	PHE 22	HIS 108
L	ILE 4	CYS 160
M	SER 96	GLN 419
N	LYS 4	PRO 74
P	LYS 37	GLN 57
A	ASN 34	PRO 469

There are173 helices in PDB entry 9QO2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	35	42	Right-handed alpha
Helix 2	AA2	B	50	61	Right-handed alpha
Helix 3	AA3	B	65	82	Right-handed alpha
Helix 4	AA4	B	84	93	Right-handed alpha
Helix 5	AA5	B	95	100	Right-handed 310
Helix 6	AA6	B	104	119	Right-handed alpha
Helix 7	AA7	B	126	140	Right-handed alpha
Helix 8	AA8	B	144	162	Right-handed alpha
Helix 9	AA9	B	165	172	Right-handed alpha
Helix 10	AB1	B	175	181	Right-handed alpha
Helix 11	AB2	B	193	208	Right-handed alpha
Helix 12	AB3	B	213	222	Right-handed alpha
Helix 13	AB4	B	230	249	Right-handed alpha
Helix 14	AB5	B	252	269	Right-handed alpha
Helix 15	AB6	B	272	287	Right-handed alpha
Helix 16	AB7	B	308	321	Right-handed alpha
Helix 17	AB8	B	322	333	Right-handed alpha
Helix 18	AB9	B	343	346	Right-handed 310
Helix 19	AC1	B	347	363	Right-handed alpha
Helix 20	AC2	B	371	379	Right-handed alpha
Helix 21	AC3	B	381	395	Right-handed alpha
Helix 22	AC4	B	419	439	Right-handed alpha
Helix 23	AC5	C	53	65	Right-handed alpha
Helix 24	AC6	C	73	89	Right-handed alpha
Helix 25	AC7	C	91	97	Right-handed alpha
Helix 26	AC8	C	99	115	Right-handed alpha
Helix 27	AC9	C	116	119	Right-handed 310
Helix 28	AD1	C	120	131	Right-handed alpha
Helix 29	AD2	C	140	153	Right-handed alpha
Helix 30	AD3	C	155	162	Right-handed 310
Helix 31	AD4	C	177	195	Right-handed alpha
Helix 32	AD5	C	197	210	Right-handed alpha
Helix 33	AD6	C	217	236	Right-handed alpha
Helix 34	AD7	C	252	257	Right-handed alpha
Helix 35	AD8	C	257	269	Right-handed alpha
Helix 36	AD9	C	271	282	Right-handed alpha
Helix 37	AE1	C	282	289	Right-handed alpha
Helix 38	AE2	C	293	310	Right-handed alpha
Helix 39	AE3	C	319	326	Right-handed alpha
Helix 40	AE4	C	330	345	Right-handed alpha
Helix 41	AE5	C	371	399	Right-handed alpha
Helix 42	AE6	C	400	407	Right-handed alpha
Helix 43	AE7	D	24	36	Right-handed alpha
Helix 44	AE8	D	39	52	Right-handed alpha
Helix 45	AE9	D	62	73	Right-handed alpha
Helix 46	AF1	D	74	76	Right-handed 310
Helix 47	AF2	D	80	93	Right-handed alpha
Helix 48	AF3	D	94	96	Right-handed 310
Helix 49	AF4	D	100	117	Right-handed alpha
Helix 50	AF5	D	119	128	Right-handed alpha
Helix 51	AF6	D	140	157	Right-handed alpha
Helix 52	AF7	D	160	175	Right-handed alpha
Helix 53	AF8	D	180	198	Right-handed alpha
Helix 54	AF9	D	200	212	Right-handed alpha
Helix 55	AG1	D	219	236	Right-handed alpha
Helix 56	AG2	D	239	252	Right-handed alpha
Helix 57	AG3	D	253	258	Right-handed 310
Helix 58	AG4	D	260	269	Right-handed alpha
Helix 59	AG5	D	274	278	Right-handed 310
Helix 60	AG6	D	279	283	Right-handed 310
Helix 61	AG7	D	286	291	Right-handed 310
Helix 62	AG8	D	298	313	Right-handed alpha
Helix 63	AG9	D	321	328	Right-handed alpha
Helix 64	AH1	D	331	345	Right-handed alpha
Helix 65	AH2	D	366	392	Right-handed alpha
Helix 66	AH3	D	392	401	Right-handed alpha
Helix 67	AH4	E	232	241	Right-handed alpha
Helix 68	AH5	E	246	251	Right-handed alpha
Helix 69	AH6	E	254	257	Right-handed 310
Helix 70	AH7	E	258	283	Right-handed alpha
Helix 71	AH8	E	299	329	Right-handed alpha
Helix 72	AH9	F	217	248	Right-handed alpha
Helix 73	AI1	F	253	266	Right-handed alpha
Helix 74	AI2	F	272	312	Right-handed alpha
Helix 75	AI3	G	11	19	Right-handed alpha
Helix 76	AI4	G	26	35	Right-handed alpha
Helix 77	AI5	G	49	55	Right-handed alpha
Helix 78	AI6	G	60	73	Right-handed alpha
Helix 79	AI7	G	74	81	Right-handed alpha
Helix 80	AI8	G	89	108	Right-handed alpha
Helix 81	AI9	G	113	121	Right-handed alpha
Helix 82	AJ1	G	124	138	Right-handed alpha
Helix 83	AJ2	G	163	165	Right-handed 310
Helix 84	AJ3	G	166	222	Right-handed alpha
Helix 85	AJ4	H	13	27	Right-handed alpha
Helix 86	AJ5	H	33	47	Right-handed alpha
Helix 87	AJ6	H	49	60	Right-handed alpha
Helix 88	AJ7	H	61	68	Right-handed alpha
Helix 89	AJ8	H	69	84	Right-handed alpha
Helix 90	AJ9	H	85	94	Right-handed alpha
Helix 91	AK1	H	102	124	Right-handed alpha
Helix 92	AK2	H	130	137	Right-handed alpha
Helix 93	AK3	H	140	148	Right-handed alpha
Helix 94	AK4	H	149	152	Right-handed 310
Helix 95	AK5	H	196	209	Right-handed alpha
Helix 96	AK6	I	19	32	Right-handed alpha
Helix 97	AK7	I	41	55	Right-handed alpha
Helix 98	AK8	I	88	104	Right-handed alpha
Helix 99	AK9	I	105	106	Right-handed 310
Helix 100	AL1	I	115	115	Right-handed 310
Helix 101	AL2	I	116	139	Right-handed alpha
Helix 102	AL3	I	140	149	Right-handed 310
Helix 103	AL4	I	158	193	Right-handed alpha
Helix 104	AL5	I	199	210	Right-handed alpha
Helix 105	AL6	I	228	249	Right-handed alpha
Helix 106	AL7	I	260	279	Right-handed alpha
Helix 107	AL8	I	283	312	Right-handed alpha
Helix 108	AL9	I	316	327	Right-handed alpha
Helix 109	AM1	I	330	356	Right-handed alpha
Helix 110	AM2	I	363	385	Right-handed alpha
Helix 111	AM3	I	388	405	Right-handed alpha
Helix 112	AM4	I	406	412	Right-handed alpha
Helix 113	AM5	I	417	430	Right-handed alpha
Helix 114	AM6	I	438	454	Right-handed alpha
Helix 115	AM7	I	458	476	Right-handed alpha
Helix 116	AM8	I	481	496	Right-handed alpha
Helix 117	AM9	I	497	502	Right-handed alpha
Helix 118	AN1	I	504	528	Right-handed alpha
Helix 119	AN2	I	559	574	Right-handed alpha
Helix 120	AN3	I	611	615	Right-handed 310
Helix 121	AN4	I	622	629	Right-handed alpha
Helix 122	AN5	I	632	646	Right-handed alpha
Helix 123	AN6	I	704	723	Right-handed alpha
Helix 124	AN7	I	726	739	Right-handed alpha
Helix 125	AN8	I	745	750	Right-handed alpha
Helix 126	AN9	J	53	59	Right-handed alpha
Helix 127	AO1	J	81	89	Right-handed alpha
Helix 128	AO2	L	17	22	Right-handed alpha
Helix 129	AO3	L	24	33	Right-handed alpha
Helix 130	AO4	L	51	65	Right-handed alpha
Helix 131	AO5	L	89	93	Right-handed alpha
Helix 132	AO6	L	98	111	Right-handed alpha
Helix 133	AO7	L	113	128	Right-handed alpha
Helix 134	AO8	L	134	140	Right-handed alpha
Helix 135	AO9	L	149	157	Right-handed alpha
Helix 136	AP1	M	101	110	Right-handed alpha
Helix 137	AP2	M	113	122	Right-handed alpha
Helix 138	AP3	M	124	132	Right-handed alpha
Helix 139	AP4	M	148	159	Right-handed alpha
Helix 140	AP5	M	195	203	Right-handed alpha
Helix 141	AP6	M	219	229	Right-handed alpha
Helix 142	AP7	M	244	255	Right-handed alpha
Helix 143	AP8	M	270	281	Right-handed alpha
Helix 144	AP9	M	298	309	Right-handed alpha
Helix 145	AQ1	M	326	331	Right-handed alpha
Helix 146	AQ2	M	332	334	Right-handed 310
Helix 147	AQ3	M	351	359	Right-handed 310
Helix 148	AQ4	M	375	383	Right-handed alpha
Helix 149	AQ5	N	25	30	Right-handed alpha
Helix 150	AQ6	N	39	47	Right-handed alpha
Helix 151	AQ7	A	43	48	Right-handed alpha
Helix 152	AQ8	A	49	50	Right-handed 310
Helix 153	AQ9	A	51	53	Right-handed 310
Helix 154	AR1	A	54	67	Right-handed alpha
Helix 155	AR2	A	70	83	Right-handed alpha
Helix 156	AR3	A	87	106	Right-handed alpha
Helix 157	AR4	A	127	155	Right-handed alpha
Helix 158	AR5	A	157	175	Right-handed alpha
Helix 159	AR6	A	180	187	Right-handed alpha
Helix 160	AR7	A	196	213	Right-handed alpha
Helix 161	AR8	A	214	226	Right-handed alpha
Helix 162	AR9	A	242	260	Right-handed alpha
Helix 163	AS1	A	267	272	Right-handed alpha
Helix 164	AS2	A	284	301	Right-handed alpha
Helix 165	AS3	A	302	310	Right-handed alpha
Helix 166	AS4	A	313	322	Right-handed alpha
Helix 167	AS5	A	323	335	Right-handed alpha
Helix 168	AS6	A	337	354	Right-handed alpha
Helix 169	AS7	A	358	360	Right-handed 310
Helix 170	AS8	A	361	379	Right-handed alpha
Helix 171	AS9	A	386	393	Right-handed alpha
Helix 172	AT1	A	396	410	Right-handed alpha
Helix 173	AT2	A	430	462	Right-handed alpha

There are 13 sheets in PDB entry 9QO2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	408	411	anti-parallel
Strand 3	B	400	403	anti-parallel
Strand 4	A	381	385	parallel
Strand 5	A	423	426	anti-parallel
Strand 6	A	415	418	anti-parallel
Strand 7	C	314	318	parallel
Strand 8	C	357	360	anti-parallel
Strand 9	C	349	352	anti-parallel
Strand 10	H	125	129	parallel
Strand 11	H	161	163	anti-parallel
Strand 12	H	154	156	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	318	320	first strand
Strand 2	D	358	360	anti-parallel
Strand 3	D	351	353	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	110	112	first strand
Strand 2	G	151	157	anti-parallel
Strand 3	G	141	146	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	535	541	first strand
Strand 2	J	27	35	parallel
Strand 3	I	577	582	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	679	681	first strand
Strand 2	I	600	604	parallel
Strand 3	I	587	591	anti-parallel
Strand 4	J	24	25	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	620	621	first strand
Strand 2	I	668	669	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	70	71	first strand
Strand 2	J	79	80	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	314	316	first strand
Strand 2	M	287	289	parallel
Strand 3	M	260	263	parallel
Strand 4	M	234	237	parallel
Strand 5	M	210	212	parallel
Strand 6	M	185	187	parallel
Strand 7	M	162	164	parallel
Strand 8	M	139	141	parallel
Strand 9	M	416	417	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	216	217	first strand
Strand 2	M	240	241	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	339	341	first strand
Strand 2	M	364	366	parallel
Strand 3	M	387	388	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	408	409	first strand
Strand 2	M	412	413	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	7	8	first strand
Strand 2	N	18	23	anti-parallel
Strand 3	N	12	13	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	7	8	first strand
Strand 2	N	18	23	anti-parallel
Strand 3	N	66	71	anti-parallel
Strand 4	N	55	56	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9QO2

Analysis of interatomic Contacts of Structural Units in PDB entry:
9QO2