Analysis of interatomic Contacts of Structural Units in PDB entry:
9QOP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QOP entry

There are 3 chains in PDB entry 9QOP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 141ARG 192
A
 PRO 16ILE 1039
C
 SER 66ARG 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 9QOP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
143 192Right-handed alpha
Helix 2
AA2
A
17 34Right-handed alpha
Helix 3
AA3
A
36 52Right-handed alpha
Helix 4
AA4
A
55 66Right-handed alpha
Helix 5
AA5
A
70 89Right-handed alpha
Helix 6
AA6
A
102 113Right-handed alpha
Helix 7
AA7
A
114 117Right-handed 310
Helix 8
AA8
A
122 138Right-handed alpha
Helix 9
AA9
A
145 158Right-handed alpha
Helix 10
AB1
A
159 174Right-handed alpha
Helix 11
AB2
A
181 190Right-handed alpha
Helix 12
AB3
A
204 226Right-handed alpha
Helix 13
AB4
A
233 238Right-handed alpha
Helix 14
AB5
A
240 252Right-handed alpha
Helix 15
AB6
A
253 257Right-handed 310
Helix 16
AB7
A
261 276Right-handed alpha
Helix 17
AB8
A
279 285Right-handed alpha
Helix 18
AB9
A
286 310Right-handed alpha
Helix 19
AC1
A
328 343Right-handed alpha
Helix 20
AC2
A
349 365Right-handed alpha
Helix 21
AC3
A
366 369Right-handed 310
Helix 22
AC4
A
371 379Right-handed alpha
Helix 23
AC5
A
381 388Right-handed alpha
Helix 24
AC6
A
397 413Right-handed alpha
Helix 25
AC7
A
417 429Right-handed alpha
Helix 26
AC8
A
431 438Right-handed alpha
Helix 27
AC9
A
443 457Right-handed alpha
Helix 28
AD1
A
457 466Right-handed alpha
Helix 29
AD2
A
473 482Right-handed alpha
Helix 30
AD3
A
483 487Right-handed 310
Helix 31
AD4
A
491 505Right-handed alpha
Helix 32
AD5
A
506 509Right-handed 310
Helix 33
AD6
A
510 523Right-handed alpha
Helix 34
AD7
A
534 552Right-handed alpha
Helix 35
AD8
A
560 574Right-handed alpha
Helix 36
AD9
A
576 592Right-handed alpha
Helix 37
AE1
A
594 601Right-handed alpha
Helix 38
AE2
A
601 616Right-handed alpha
Helix 39
AE3
A
619 636Right-handed alpha
Helix 40
AE4
A
642 657Right-handed alpha
Helix 41
AE5
A
665 681Right-handed alpha
Helix 42
AE6
A
686 692Right-handed alpha
Helix 43
AE7
A
693 704Right-handed alpha
Helix 44
AE8
A
706 724Right-handed alpha
Helix 45
AE9
A
724 731Right-handed alpha
Helix 46
AF1
A
738 752Right-handed alpha
Helix 47
AF2
A
756 761Right-handed 310
Helix 48
AF3
A
762 771Right-handed alpha
Helix 49
AF4
A
775 781Right-handed alpha
Helix 50
AF5
A
781 793Right-handed alpha
Helix 51
AF6
A
794 796Right-handed 310
Helix 52
AF7
A
798 814Right-handed alpha
Helix 53
AF8
A
816 827Right-handed alpha
Helix 54
AF9
A
834 841Right-handed alpha
Helix 55
AG1
A
852 868Right-handed alpha
Helix 56
AG2
A
897 902Right-handed alpha
Helix 57
AG3
A
903 908Right-handed 310
Helix 58
AG4
A
912 936Right-handed alpha
Helix 59
AG5
A
991 996Right-handed 310
Helix 60
AG6
A
997 1001Right-handed 310
Helix 61
AG7
A
1003 1017Right-handed alpha
Helix 62
AG8
A
1021 1026Right-handed alpha
Helix 63
AG9
A
1029 1031Right-handed 310
Helix 64
AH1
A
1032 1039Right-handed alpha
Helix 65
AH2
C
76 91Right-handed alpha
Helix 66
AH3
C
143 192Right-handed alpha
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There are no sheets in PDB entry 9QOP
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