Analysis of interatomic Contacts of Structural Units in PDB entry:
9QQD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QQD entry

There is 1 chain in PDB entry 9QQD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3ALA 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9QQD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 76Right-handed alpha
Helix 5
AA5
A
85 93Right-handed 310
Helix 6
AA6
A
94 105Right-handed alpha
Helix 7
AA7
A
118 129Right-handed alpha
Helix 8
AA8
A
129 145Right-handed alpha
Helix 9
AA9
A
149 169Right-handed alpha
Helix 10
AB1
A
172 205Right-handed alpha
Helix 11
AB2
A
206 222Right-handed alpha
Helix 12
AB3
A
226 246Right-handed alpha
Helix 13
AB4
A
248 266Right-handed alpha
Helix 14
AB5
A
266 271Right-handed alpha
Helix 15
AB6
A
276 280Right-handed 310
Helix 16
AB7
A
281 291Right-handed alpha
Helix 17
AB8
A
304 309Right-handed alpha
Helix 18
AB9
A
313 321Right-handed alpha
Helix 19
AC1
A
321 337Right-handed alpha
Helix 20
AC2
A
341 362Right-handed alpha
Helix 21
AC3
A
364 371Right-handed alpha
Helix 22
AC4
A
371 414Right-handed alpha
Helix 23
AC5
A
418 437Right-handed alpha
Helix 24
AC6
A
440 466Right-handed alpha
Helix 25
AC7
A
469 479Right-handed alpha
Helix 26
AC8
A
482 489Right-handed alpha
Helix 27
AC9
A
502 507Right-handed alpha
Helix 28
AD1
A
511 515Right-handed 310
Helix 29
AD2
A
517 535Right-handed alpha
Helix 30
AD3
A
539 560Right-handed alpha
Helix 31
AD4
A
564 569Right-handed alpha
Helix 32
AD5
A
571 580Right-handed alpha
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There are no sheets in PDB entry 9QQD
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