Analysis of interatomic Contacts of Structural Units in PDB entry:
9QQM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QQM entry

There is 1 chain in PDB entry 9QQM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 48PRO 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9QQM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 56Right-handed alpha
Helix 2
AA2
A
57 63Right-handed alpha
Helix 3
AA3
A
64 73Right-handed alpha
Helix 4
AA4
A
73 109Right-handed alpha
Helix 5
AA5
A
119 128Right-handed alpha
Helix 6
AA6
A
129 163Right-handed alpha
Helix 7
AA7
A
167 180Right-handed alpha
Helix 8
AA8
A
181 184Right-handed 310
Helix 9
AA9
A
192 217Right-handed alpha
Helix 10
AB1
A
229 244Right-handed alpha
Helix 11
AB2
A
265 290Right-handed alpha
Helix 12
AB3
A
291 296Right-handed 310
Helix 13
AB4
A
306 340Right-handed alpha
Helix 14
AB5
A
350 368Right-handed alpha
Helix 15
AB6
A
372 387Right-handed alpha
Helix 16
AB7
A
388 399Right-handed alpha
Helix 17
AB8
A
401 407Right-handed alpha
Helix 18
AB9
A
413 416Right-handed 310
Helix 19
AC1
A
417 436Right-handed alpha
Helix 20
AC2
A
439 457Right-handed alpha
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There are no sheets in PDB entry 9QQM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il