Analysis of interatomic Contacts of Structural Units in PDB entry:
9QRF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QRF entry

There is 1 chain in PDB entry 9QRF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 10TYR 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 9QRF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 28Right-handed alpha
Helix 2
AA2
A
70 79Right-handed alpha
Helix 3
AA3
A
88 101Right-handed alpha
Helix 4
AA4
A
110 116Right-handed alpha
Helix 5
AA5
A
125 135Right-handed alpha
Helix 6
AA6
A
140 145Right-handed 310
Helix 7
AA7
A
153 166Right-handed alpha
Helix 8
AA8
A
166 181Right-handed alpha
Helix 9
AA9
A
183 203Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9QRF.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
59 64parallel
Strand 3
A
48 55anti-parallel
Strand 4
A
31 38anti-parallel
Strand 5
A
83 86parallel
Strand 6
A
107 109parallel
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