Analysis of interatomic Contacts of Structural Units in PDB entry:
9QS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QS7 entry

There are 2 chains in PDB entry 9QS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1TRP 206
B
 GLY 1PRO 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9QS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed alpha
Helix 2
AA2
A
19 30Right-handed alpha
Helix 3
AA3
A
50 56Right-handed alpha
Helix 4
AA4
A
64 71Right-handed alpha
Helix 5
AA5
A
73 77Right-handed 310
Helix 6
AA6
A
90 102Right-handed alpha
Helix 7
AA7
A
120 131Right-handed alpha
Helix 8
AA8
A
146 161Right-handed alpha
Helix 9
AA9
A
190 199Right-handed alpha
Helix 10
AB1
A
200 202Right-handed 310
Helix 11
AB2
B
2 7Right-handed alpha
Helix 12
AB3
B
19 30Right-handed alpha
Helix 13
AB4
B
50 57Right-handed alpha
Helix 14
AB5
B
68 72Right-handed alpha
Helix 15
AB6
B
73 78Right-handed alpha
Helix 16
AB7
B
90 102Right-handed alpha
Helix 17
AB8
B
120 131Right-handed alpha
Helix 18
AB9
B
146 159Right-handed alpha
Helix 19
AC1
B
190 200Right-handed alpha
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There are 6 sheets in PDB entry 9QS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
46 49anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 110first strand
Strand 2
A
113 119anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 172first strand
Strand 2
A
179 185anti-parallel
Strand 3
A
138 144anti-parallel
Strand 4
A
203 205anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 38first strand
Strand 2
B
44 49anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 110first strand
Strand 2
B
113 119anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 172first strand
Strand 2
B
179 186anti-parallel
Strand 3
B
138 144anti-parallel
Strand 4
B
203 205anti-parallel
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