Analysis of interatomic Contacts of Structural Units in PDB entry:
9QT9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QT9 entry

There are 6 chains in PDB entry 9QT9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3091CYS 4151
E
 THR 6MET 146
C
 SER 180ASP 204
B
 ARG 3091CYS 4151
F
 THR 6MET 146
D
 SER 180ASP 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are110 helices in PDB entry 9QT9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3091 3102Right-handed alpha
Helix 2
AA2
A
3102 3114Right-handed alpha
Helix 3
AA3
A
3117 3132Right-handed alpha
Helix 4
AA4
A
3188 3192Right-handed 310
Helix 5
AA5
A
3197 3208Right-handed alpha
Helix 6
AA6
A
3213 3231Right-handed alpha
Helix 7
AA7
A
3232 3245Right-handed alpha
Helix 8
AA8
A
3249 3255Right-handed 310
Helix 9
AA9
A
3256 3269Right-handed alpha
Helix 10
AB1
A
3277 3288Right-handed alpha
Helix 11
AB2
A
3289 3309Right-handed alpha
Helix 12
AB3
A
3312 3321Right-handed alpha
Helix 13
AB4
A
3350 3353Right-handed alpha
Helix 14
AB5
A
3405 3410Right-handed alpha
Helix 15
AB6
A
3411 3415Right-handed 310
Helix 16
AB7
A
3532 3570Right-handed alpha
Helix 17
AB8
A
3599 3611Right-handed alpha
Helix 18
AB9
A
3611 3643Right-handed alpha
Helix 19
AC1
A
3661 3680Right-handed alpha
Helix 20
AC2
A
3682 3693Right-handed alpha
Helix 21
AC3
A
3693 3701Right-handed alpha
Helix 22
AC4
A
3707 3723Right-handed alpha
Helix 23
AC5
A
3727 3746Right-handed alpha
Helix 24
AC6
A
3747 3750Right-handed 310
Helix 25
AC7
A
3751 3769Right-handed alpha
Helix 26
AC8
A
3773 3793Right-handed alpha
Helix 27
AC9
A
3795 3802Right-handed alpha
Helix 28
AD1
A
3802 3815Right-handed alpha
Helix 29
AD2
A
3857 3866Right-handed alpha
Helix 30
AD3
A
3870 3876Right-handed alpha
Helix 31
AD4
A
3879 3897Right-handed alpha
Helix 32
AD5
A
3903 3923Right-handed alpha
Helix 33
AD6
A
3937 3943Right-handed alpha
Helix 34
AD7
A
3947 3963Right-handed alpha
Helix 35
AD8
A
3965 3979Right-handed alpha
Helix 36
AD9
A
3982 3987Right-handed alpha
Helix 37
AE1
A
3990 4001Right-handed alpha
Helix 38
AE2
A
4003 4013Right-handed alpha
Helix 39
AE3
A
4014 4033Right-handed alpha
Helix 40
AE4
A
4034 4036Right-handed 310
Helix 41
AE5
A
4044 4059Right-handed alpha
Helix 42
AE6
A
4060 4070Right-handed alpha
Helix 43
AE7
A
4072 4085Right-handed alpha
Helix 44
AE8
A
4091 4112Right-handed alpha
Helix 45
AE9
A
4112 4132Right-handed alpha
Helix 46
AF1
A
4135 4151Right-handed alpha
Helix 47
AF2
E
7 21Right-handed alpha
Helix 48
AF3
E
32 40Right-handed alpha
Helix 49
AF4
E
45 57Right-handed alpha
Helix 50
AF5
E
66 78Right-handed alpha
Helix 51
AF6
E
90 94Right-handed alpha
Helix 52
AF7
E
102 112Right-handed alpha
Helix 53
AF8
E
120 129Right-handed alpha
Helix 54
AF9
E
138 146Right-handed alpha
Helix 55
AG1
C
181 204Right-handed alpha
Helix 56
AG2
B
3092 3102Right-handed alpha
Helix 57
AG3
B
3102 3114Right-handed alpha
Helix 58
AG4
B
3117 3132Right-handed alpha
Helix 59
AG5
B
3188 3192Right-handed 310
Helix 60
AG6
B
3197 3208Right-handed alpha
Helix 61
AG7
B
3213 3231Right-handed alpha
Helix 62
AG8
B
3232 3245Right-handed alpha
Helix 63
AG9
B
3249 3255Right-handed 310
Helix 64
AH1
B
3256 3269Right-handed alpha
Helix 65
AH2
B
3277 3288Right-handed alpha
Helix 66
AH3
B
3289 3309Right-handed alpha
Helix 67
AH4
B
3312 3321Right-handed alpha
Helix 68
AH5
B
3350 3353Right-handed alpha
Helix 69
AH6
B
3405 3410Right-handed alpha
Helix 70
AH7
B
3411 3415Right-handed 310
Helix 71
AH8
B
3532 3570Right-handed alpha
Helix 72
AH9
B
3599 3611Right-handed alpha
Helix 73
AI1
B
3611 3643Right-handed alpha
Helix 74
AI2
B
3661 3680Right-handed alpha
Helix 75
AI3
B
3682 3693Right-handed alpha
Helix 76
AI4
B
3693 3701Right-handed alpha
Helix 77
AI5
B
3707 3723Right-handed alpha
Helix 78
AI6
B
3727 3746Right-handed alpha
Helix 79
AI7
B
3747 3750Right-handed 310
Helix 80
AI8
B
3751 3769Right-handed alpha
Helix 81
AI9
B
3773 3793Right-handed alpha
Helix 82
AJ1
B
3795 3802Right-handed alpha
Helix 83
AJ2
B
3802 3815Right-handed alpha
Helix 84
AJ3
B
3857 3866Right-handed alpha
Helix 85
AJ4
B
3870 3876Right-handed alpha
Helix 86
AJ5
B
3879 3897Right-handed alpha
Helix 87
AJ6
B
3903 3923Right-handed alpha
Helix 88
AJ7
B
3937 3943Right-handed alpha
Helix 89
AJ8
B
3947 3963Right-handed alpha
Helix 90
AJ9
B
3965 3979Right-handed alpha
Helix 91
AK1
B
3982 3987Right-handed alpha
Helix 92
AK2
B
3990 4001Right-handed alpha
Helix 93
AK3
B
4003 4013Right-handed alpha
Helix 94
AK4
B
4014 4033Right-handed alpha
Helix 95
AK5
B
4034 4036Right-handed 310
Helix 96
AK6
B
4044 4059Right-handed alpha
Helix 97
AK7
B
4060 4070Right-handed alpha
Helix 98
AK8
B
4072 4085Right-handed alpha
Helix 99
AK9
B
4091 4112Right-handed alpha
Helix 100
AL1
B
4112 4132Right-handed alpha
Helix 101
AL2
B
4135 4151Right-handed alpha
Helix 102
AL3
F
7 21Right-handed alpha
Helix 103
AL4
F
32 40Right-handed alpha
Helix 104
AL5
F
45 57Right-handed alpha
Helix 105
AL6
F
66 78Right-handed alpha
Helix 106
AL7
F
90 94Right-handed alpha
Helix 107
AL8
F
102 112Right-handed alpha
Helix 108
AL9
F
120 129Right-handed alpha
Helix 109
AM1
F
138 146Right-handed alpha
Helix 110
AM2
D
181 204Right-handed alpha
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There are 6 sheets in PDB entry 9QT9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3354 3359first strand
Strand 2
A
3363 3379anti-parallel
Strand 3
A
3430 3449anti-parallel
Strand 4
A
3392 3398anti-parallel
Strand 5
A
3416 3422anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3354 3359first strand
Strand 2
A
3363 3379anti-parallel
Strand 3
A
3518 3523anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
27 29first strand
Strand 2
E
63 65anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3354 3359first strand
Strand 2
B
3363 3379anti-parallel
Strand 3
B
3430 3449anti-parallel
Strand 4
B
3392 3398anti-parallel
Strand 5
B
3416 3422anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3354 3359first strand
Strand 2
B
3363 3379anti-parallel
Strand 3
B
3518 3523anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
27 29first strand
Strand 2
F
63 65anti-parallel
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