Analysis of interatomic Contacts of Structural Units in PDB entry:
9QWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QWV entry

There are 2 chains in PDB entry 9QWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 14ALA 267
B
 PRO 14ALA 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9QWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 56Right-handed alpha
Helix 2
AA2
A
76 81Right-handed alpha
Helix 3
AA3
A
84 92Right-handed alpha
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
98 103Right-handed alpha
Helix 6
AA6
A
117 126Right-handed alpha
Helix 7
AA7
A
140 145Right-handed 310
Helix 8
AA8
A
154 161Right-handed alpha
Helix 9
AA9
A
161 172Right-handed alpha
Helix 10
AB1
A
177 184Right-handed alpha
Helix 11
AB2
A
191 193Right-handed 310
Helix 12
AB3
A
194 208Right-handed alpha
Helix 13
AB4
A
210 224Right-handed alpha
Helix 14
AB5
A
228 244Right-handed alpha
Helix 15
AB6
A
246 259Right-handed alpha
Helix 16
AB7
B
40 56Right-handed alpha
Helix 17
AB8
B
77 82Right-handed alpha
Helix 18
AB9
B
84 91Right-handed alpha
Helix 19
AC1
B
92 97Right-handed 310
Helix 20
AC2
B
98 103Right-handed alpha
Helix 21
AC3
B
117 126Right-handed alpha
Helix 22
AC4
B
140 145Right-handed 310
Helix 23
AC5
B
151 161Right-handed alpha
Helix 24
AC6
B
161 172Right-handed alpha
Helix 25
AC7
B
177 184Right-handed alpha
Helix 26
AC8
B
191 193Right-handed 310
Helix 27
AC9
B
194 208Right-handed alpha
Helix 28
AD1
B
210 224Right-handed alpha
Helix 29
AD2
B
228 242Right-handed alpha
Helix 30
AD3
B
243 245Right-handed 310
Helix 31
AD4
B
246 259Right-handed alpha
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There are 5 sheets in PDB entry 9QWV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
23 29anti-parallel
Strand 3
A
20 21anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
23 29anti-parallel
Strand 3
A
59 65parallel
Strand 4
A
107 111parallel
Strand 5
A
128 132parallel
Strand 6
A
188 190parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
114 116parallel
Strand 3
A
136 138parallel
Strand 4
A
174 176anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 28first strand
Strand 2
B
61 65parallel
Strand 3
B
107 111parallel
Strand 4
B
128 132parallel
Strand 5
B
188 190parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
114 116parallel
Strand 3
B
136 138parallel
Strand 4
B
174 176anti-parallel
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