Analysis of interatomic Contacts of Structural Units in PDB entry:
9QX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QX0 entry

There are 5 chains in PDB entry 9QX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 SER 289GLU 331
F
 GLU 8MET 146
A
 HIS 3188MET 4298
C
 SER 289GLU 331
B
 LYS 3223LYS 4780
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are124 helices in PDB entry 9QX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
291 297Right-handed 310
Helix 2
AA2
D
302 327Right-handed alpha
Helix 3
AA3
F
9 21Right-handed alpha
Helix 4
AA4
F
29 31Right-handed 310
Helix 5
AA5
F
32 40Right-handed alpha
Helix 6
AA6
F
45 57Right-handed alpha
Helix 7
AA7
F
65 77Right-handed alpha
Helix 8
AA8
F
84 94Right-handed alpha
Helix 9
AA9
F
102 114Right-handed alpha
Helix 10
AB1
F
118 129Right-handed alpha
Helix 11
AB2
F
138 146Right-handed alpha
Helix 12
AB3
A
3189 3200Right-handed alpha
Helix 13
AB4
A
3203 3218Right-handed alpha
Helix 14
AB5
A
3220 3247Right-handed alpha
Helix 15
AB6
A
3265 3286Right-handed alpha
Helix 16
AB7
A
3286 3297Right-handed alpha
Helix 17
AB8
A
3299 3311Right-handed alpha
Helix 18
AB9
A
3315 3328Right-handed alpha
Helix 19
AC1
A
3328 3338Right-handed alpha
Helix 20
AC2
A
3387 3403Right-handed alpha
Helix 21
AC3
A
3404 3417Right-handed alpha
Helix 22
AC4
A
3421 3439Right-handed alpha
Helix 23
AC5
A
3440 3455Right-handed alpha
Helix 24
AC6
A
3457 3462Right-handed alpha
Helix 25
AC7
A
3465 3479Right-handed alpha
Helix 26
AC8
A
3482 3506Right-handed alpha
Helix 27
AC9
A
3509 3520Right-handed alpha
Helix 28
AD1
A
3532 3537Right-handed alpha
Helix 29
AD2
A
3602 3607Right-handed 310
Helix 30
AD3
A
3728 3770Right-handed alpha
Helix 31
AD4
A
3793 3843Right-handed alpha
Helix 32
AD5
A
3852 3860Right-handed alpha
Helix 33
AD6
A
3872 3891Right-handed alpha
Helix 34
AD7
A
3893 3904Right-handed alpha
Helix 35
AD8
A
3904 3912Right-handed alpha
Helix 36
AD9
A
3918 3933Right-handed alpha
Helix 37
AE1
A
3936 3957Right-handed alpha
Helix 38
AE2
A
3961 3967Right-handed alpha
Helix 39
AE3
A
3968 3981Right-handed alpha
Helix 40
AE4
A
3985 4001Right-handed alpha
Helix 41
AE5
A
4005 4012Right-handed alpha
Helix 42
AE6
A
4012 4025Right-handed alpha
Helix 43
AE7
A
4031 4035Right-handed 310
Helix 44
AE8
A
4038 4043Right-handed 310
Helix 45
AE9
A
4055 4061Right-handed alpha
Helix 46
AF1
A
4067 4075Right-handed alpha
Helix 47
AF2
A
4093 4112Right-handed alpha
Helix 48
AF3
A
4127 4134Right-handed alpha
Helix 49
AF4
A
4138 4153Right-handed alpha
Helix 50
AF5
A
4155 4169Right-handed alpha
Helix 51
AF6
A
4170 4174Right-handed 310
Helix 52
AF7
A
4180 4191Right-handed alpha
Helix 53
AF8
A
4193 4203Right-handed alpha
Helix 54
AF9
A
4204 4227Right-handed alpha
Helix 55
AG1
A
4235 4250Right-handed alpha
Helix 56
AG2
A
4251 4276Right-handed alpha
Helix 57
AG3
A
4281 4298Right-handed alpha
Helix 58
AG4
C
291 297Right-handed 310
Helix 59
AG5
C
302 328Right-handed alpha
Helix 60
AG6
B
3224 3247Right-handed alpha
Helix 61
AG7
B
3265 3286Right-handed alpha
Helix 62
AG8
B
3286 3297Right-handed alpha
Helix 63
AG9
B
3300 3311Right-handed alpha
Helix 64
AH1
B
3312 3314Right-handed 310
Helix 65
AH2
B
3315 3328Right-handed alpha
Helix 66
AH3
B
3388 3403Right-handed alpha
Helix 67
AH4
B
3404 3417Right-handed alpha
Helix 68
AH5
B
3421 3439Right-handed alpha
Helix 69
AH6
B
3440 3455Right-handed alpha
Helix 70
AH7
B
3457 3462Right-handed alpha
Helix 71
AH8
B
3465 3479Right-handed alpha
Helix 72
AH9
B
3482 3506Right-handed alpha
Helix 73
AI1
B
3509 3520Right-handed alpha
Helix 74
AI2
B
3728 3770Right-handed alpha
Helix 75
AI3
B
3793 3836Right-handed alpha
Helix 76
AI4
B
3855 3859Right-handed alpha
Helix 77
AI5
B
3872 3891Right-handed alpha
Helix 78
AI6
B
3893 3904Right-handed alpha
Helix 79
AI7
B
3904 3912Right-handed alpha
Helix 80
AI8
B
3918 3933Right-handed alpha
Helix 81
AI9
B
3936 3957Right-handed alpha
Helix 82
AJ1
B
3961 3967Right-handed alpha
Helix 83
AJ2
B
3968 3981Right-handed alpha
Helix 84
AJ3
B
3985 4001Right-handed alpha
Helix 85
AJ4
B
4005 4012Right-handed alpha
Helix 86
AJ5
B
4012 4025Right-handed alpha
Helix 87
AJ6
B
4031 4035Right-handed 310
Helix 88
AJ7
B
4039 4043Right-handed 310
Helix 89
AJ8
B
4055 4061Right-handed alpha
Helix 90
AJ9
B
4063 4066Right-handed 310
Helix 91
AK1
B
4067 4075Right-handed alpha
Helix 92
AK2
B
4088 4113Right-handed alpha
Helix 93
AK3
B
4127 4134Right-handed alpha
Helix 94
AK4
B
4138 4153Right-handed alpha
Helix 95
AK5
B
4155 4170Right-handed alpha
Helix 96
AK6
B
4171 4174Right-handed 310
Helix 97
AK7
B
4180 4191Right-handed alpha
Helix 98
AK8
B
4193 4203Right-handed alpha
Helix 99
AK9
B
4204 4227Right-handed alpha
Helix 100
AL1
B
4235 4250Right-handed alpha
Helix 101
AL2
B
4251 4276Right-handed alpha
Helix 102
AL3
B
4281 4299Right-handed alpha
Helix 103
AL4
B
4302 4320Right-handed alpha
Helix 104
AL5
B
4326 4340Right-handed alpha
Helix 105
AL6
B
4473 4482Right-handed alpha
Helix 106
AL7
B
4483 4495Right-handed alpha
Helix 107
AL8
B
4498 4500Right-handed 310
Helix 108
AL9
B
4501 4517Right-handed alpha
Helix 109
AM1
B
4518 4527Right-handed alpha
Helix 110
AM2
B
4528 4530Right-handed 310
Helix 111
AM3
B
4531 4550Right-handed alpha
Helix 112
AM4
B
4554 4575Right-handed alpha
Helix 113
AM5
B
4593 4602Right-handed alpha
Helix 114
AM6
B
4614 4624Right-handed alpha
Helix 115
AM7
B
4627 4639Right-handed alpha
Helix 116
AM8
B
4640 4642Right-handed 310
Helix 117
AM9
B
4643 4648Right-handed alpha
Helix 118
AN1
B
4655 4668Right-handed alpha
Helix 119
AN2
B
4672 4686Right-handed alpha
Helix 120
AN3
B
4686 4698Right-handed alpha
Helix 121
AN4
B
4723 4730Right-handed alpha
Helix 122
AN5
B
4733 4751Right-handed alpha
Helix 123
AN6
B
4762 4772Right-handed alpha
Helix 124
AN7
B
4774 4780Right-handed alpha
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There are 5 sheets in PDB entry 9QX0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3249 3251first strand
Strand 2
A
3256 3258anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3543 3546first strand
Strand 2
A
3710 3719anti-parallel
Strand 3
A
3560 3579anti-parallel
Strand 4
A
3551 3556anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3543 3546first strand
Strand 2
A
3710 3719anti-parallel
Strand 3
A
3560 3579anti-parallel
Strand 4
A
3627 3643anti-parallel
Strand 5
A
3590 3595anti-parallel
Strand 6
A
3613 3618anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4051 4052first strand
Strand 2
A
4119 4120anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4051 4052first strand
Strand 2
B
4119 4120anti-parallel
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