Analysis of interatomic Contacts of Structural Units in PDB entry:
9QYE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QYE entry

There is 1 chain in PDB entry 9QYE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 106GLU 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 9QYE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
147 158Right-handed alpha
Helix 2
AA2
A
159 173Right-handed alpha
Helix 3
AA3
A
202 204Right-handed 310
Helix 4
AA4
A
205 227Right-handed alpha
Helix 5
AA5
A
247 264Right-handed alpha
Helix 6
AA6
A
281 297Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9QYE.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 113first strand
Strand 2
A
119 124anti-parallel
Strand 3
A
274 279parallel
Strand 4
A
233 236parallel
Strand 5
A
134 139parallel
Strand 6
A
192 197parallel
Strand 7
A
180 184anti-parallel
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