Analysis of interatomic Contacts of Structural Units in PDB entry:
9QYL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QYL entry

There are 24 chains in PDB entry 9QYL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 GLY 36ASP 98
F
 GLY 36ASP 98
G
 GLY 36ASP 98
H
 GLY 36ASP 98
J
 GLY 36ASP 98
K
 GLY 36ASP 98
L
 GLY 36ASP 98
M
 GLY 36ASP 98
N
 GLY 36ASP 98
O
 GLY 36ASP 98
P
 GLY 36ASP 98
Q
 GLY 36ASP 98
e
 VAL 16THR 22
f
 VAL 16THR 22
g
 VAL 16THR 22
h
 VAL 16THR 22
j
 VAL 16THR 22
k
 VAL 16THR 22
l
 VAL 16THR 22
m
 VAL 16THR 22
n
 VAL 16THR 22
o
 VAL 16THR 22
p
 VAL 16THR 22
q
 VAL 16THR 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9QYL

There are 15 sheets in PDB entry 9QYL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
37 40first strand
Strand 2
G
37 40parallel
Strand 3
J
37 40parallel
Strand 4
L
37 40parallel
Strand 5
N
37 40parallel
Strand 6
P
37 40parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
45 55first strand
Strand 2
G
45 66parallel
Strand 3
E
58 66parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
45 55first strand
Strand 2
G
45 66parallel
Strand 3
J
45 66parallel
Strand 4
L
45 66parallel
Strand 5
N
45 66parallel
Strand 6
P
45 66parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
69 71first strand
Strand 2
G
69 71parallel
Strand 3
J
69 71parallel
Strand 4
L
69 72parallel
Strand 5
N
69 72parallel
Strand 6
P
69 71parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
75 80first strand
Strand 2
G
75 80parallel
Strand 3
J
75 80parallel
Strand 4
L
75 80parallel
Strand 5
N
75 82parallel
Strand 6
P
78 82parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 88first strand
Strand 2
G
86 88parallel
Strand 3
J
86 88parallel
Strand 4
L
86 88parallel
Strand 5
N
86 88parallel
Strand 6
P
86 88parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
91 92first strand
Strand 2
G
91 92parallel
Strand 3
J
91 92parallel
Strand 4
L
91 92parallel
Strand 5
N
91 92parallel
Strand 6
P
91 92parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
95 96first strand
Strand 2
G
95 96parallel
Strand 3
J
95 96parallel
Strand 4
L
95 96parallel
Strand 5
N
95 96parallel
Strand 6
P
95 96parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
37 40first strand
Strand 2
H
37 40parallel
Strand 3
K
37 40parallel
Strand 4
M
37 40parallel
Strand 5
O
37 40parallel
Strand 6
Q
37 40parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
45 66first strand
Strand 2
H
45 66parallel
Strand 3
K
45 66parallel
Strand 4
M
45 66parallel
Strand 5
O
45 66parallel
Strand 6
Q
45 66parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
69 71first strand
Strand 2
H
69 71parallel
Strand 3
K
69 71parallel
Strand 4
M
69 71parallel
Strand 5
O
69 71parallel
Strand 6
Q
69 71parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
78 80first strand
Strand 2
H
78 80parallel
Strand 3
K
78 80parallel
Strand 4
M
75 80parallel
Strand 5
O
75 80parallel
Strand 6
Q
75 80parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
86 88first strand
Strand 2
H
86 88parallel
Strand 3
K
86 88parallel
Strand 4
M
86 88parallel
Strand 5
O
86 88parallel
Strand 6
Q
86 88parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
91 92first strand
Strand 2
H
91 92parallel
Strand 3
K
91 92parallel
Strand 4
M
91 92parallel
Strand 5
O
91 92parallel
Strand 6
Q
91 92parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
95 96first strand
Strand 2
H
95 96parallel
Strand 3
K
95 96parallel
Strand 4
M
95 96parallel
Strand 5
O
95 96parallel
Strand 6
Q
95 96parallel
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