Analysis of interatomic Contacts of Structural Units in PDB entry:
9QYQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QYQ entry

There is 1 chain in PDB entry 9QYQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2CYS 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9QYQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 18Right-handed 310
Helix 2
AA2
A
30 34Right-handed 310
Helix 3
AA3
A
64 67Right-handed 310
Helix 4
AA4
A
68 78Right-handed alpha
Helix 5
AA5
A
93 111Right-handed alpha
Helix 6
AA6
A
113 118Right-handed alpha
Helix 7
AA7
A
131 144Right-handed alpha
Helix 8
AA8
A
184 192Right-handed alpha
Helix 9
AA9
A
209 213Right-handed 310
Helix 10
AB1
A
215 231Right-handed alpha
Helix 11
AB2
A
233 240Right-handed 310
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There are 2 sheets in PDB entry 9QYQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 29first strand
Strand 2
A
40 46anti-parallel
Strand 3
A
81 85anti-parallel
Strand 4
A
52 58parallel
Strand 5
A
120 130parallel
Strand 6
A
150 153parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 173first strand
Strand 2
A
198 203parallel
Strand 3
A
248 253anti-parallel
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