Analysis of interatomic Contacts of Structural Units in PDB entry:
9R0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R0O entry

There is 1 chain in PDB entry 9R0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
CYS 23SER 635
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9R0O. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
25 29Right-handed 310
Helix 2
AA2
A
30 64Right-handed alpha
Helix 3
AA3
A
66 91Right-handed alpha
Helix 4
AA4
A
92 94Right-handed 310
Helix 5
AA5
A
96 122Right-handed alpha
Helix 6
AA6
A
164 185Right-handed alpha
Helix 7
AA7
A
186 199Right-handed alpha
Helix 8
AA8
A
203 217Right-handed alpha
Helix 9
AA9
A
217 230Right-handed alpha
Helix 10
AB1
A
256 273Right-handed alpha
Helix 11
AB2
A
274 278Right-handed 310
Helix 12
AB3
A
307 313Right-handed alpha
Helix 13
AB4
A
313 323Right-handed alpha
Helix 14
AB5
A
324 357Right-handed alpha
Helix 15
AB6
A
359 370Right-handed alpha
Helix 16
AB7
A
370 389Right-handed alpha
Helix 17
AB8
A
394 412Right-handed alpha
Helix 18
AB9
A
413 416Right-handed 310
Helix 19
AC1
A
442 446Right-handed 310
Helix 20
AC2
A
468 473Right-handed alpha
Helix 21
AC3
A
511 513Right-handed 310
Helix 22
AC4
A
514 530Right-handed alpha
Helix 23
AC5
A
532 544Right-handed alpha
Helix 24
AC6
A
547 564Right-handed alpha
Helix 25
AC7
A
566 579Right-handed alpha
Helix 26
AC8
A
598 635Right-handed alpha
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There are 2 sheets in PDB entry 9R0O. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
465 466first strand
Strand 2
A
458 460anti-parallel
Strand 3
A
501 504anti-parallel
Strand 4
A
488 490anti-parallel
Strand 5
A
476 478anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
580 585first strand
Strand 2
A
591 597anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il