Analysis of interatomic Contacts of Structural Units in PDB entry:
9R0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R0P entry

There are 3 chains in PDB entry 9R0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 28THR 326
C
 PRO 28THR 326
D
 PRO 28THR 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 9R0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
34 38Right-handed 310
Helix 2
AA2
B
39 41Right-handed 310
Helix 3
AA3
B
48 55Right-handed alpha
Helix 4
AA4
B
59 64Right-handed 310
Helix 5
AA5
B
65 80Right-handed alpha
Helix 6
AA6
B
83 96Right-handed alpha
Helix 7
AA7
B
99 112Right-handed alpha
Helix 8
AA8
B
123 128Right-handed alpha
Helix 9
AA9
B
134 138Right-handed 310
Helix 10
AB1
B
139 155Right-handed alpha
Helix 11
AB2
B
166 175Right-handed alpha
Helix 12
AB3
B
186 188Right-handed 310
Helix 13
AB4
B
189 194Right-handed alpha
Helix 14
AB5
B
211 215Right-handed 310
Helix 15
AB6
B
221 227Right-handed 310
Helix 16
AB7
B
228 235Right-handed alpha
Helix 17
AB8
B
250 255Right-handed alpha
Helix 18
AB9
B
256 264Right-handed alpha
Helix 19
AC1
B
282 297Right-handed alpha
Helix 20
AC2
B
308 326Right-handed alpha
Helix 21
AC3
C
32 37Right-handed alpha
Helix 22
AC4
C
39 41Right-handed 310
Helix 23
AC5
C
48 55Right-handed alpha
Helix 24
AC6
C
59 63Right-handed 310
Helix 25
AC7
C
64 79Right-handed alpha
Helix 26
AC8
C
83 96Right-handed alpha
Helix 27
AC9
C
99 112Right-handed alpha
Helix 28
AD1
C
121 131Right-handed alpha
Helix 29
AD2
C
134 138Right-handed 310
Helix 30
AD3
C
139 156Right-handed alpha
Helix 31
AD4
C
166 176Right-handed alpha
Helix 32
AD5
C
186 195Right-handed alpha
Helix 33
AD6
C
211 215Right-handed 310
Helix 34
AD7
C
219 227Right-handed alpha
Helix 35
AD8
C
228 242Right-handed alpha
Helix 36
AD9
C
250 255Right-handed 310
Helix 37
AE1
C
256 262Right-handed alpha
Helix 38
AE2
C
263 266Right-handed 310
Helix 39
AE3
C
282 297Right-handed alpha
Helix 40
AE4
C
308 326Right-handed alpha
Helix 41
AE5
D
32 38Right-handed alpha
Helix 42
AE6
D
39 41Right-handed 310
Helix 43
AE7
D
48 55Right-handed alpha
Helix 44
AE8
D
139 155Right-handed alpha
Helix 45
AE9
D
166 175Right-handed alpha
Helix 46
AF1
D
186 195Right-handed alpha
Helix 47
AF2
D
218 228Right-handed alpha
Helix 48
AF3
D
228 242Right-handed alpha
Helix 49
AF4
D
251 254Right-handed 310
Helix 50
AF5
D
255 262Right-handed alpha
Helix 51
AF6
D
282 297Right-handed alpha
Helix 52
AF7
D
308 326Right-handed alpha
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There are 3 sheets in PDB entry 9R0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 182first strand
Strand 2
B
201 204parallel
Strand 3
B
158 161parallel
Strand 4
B
43 47parallel
Strand 5
B
243 246parallel
Strand 6
B
274 277parallel
Strand 7
B
298 301parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
180 182first strand
Strand 2
C
201 204parallel
Strand 3
C
158 161parallel
Strand 4
C
43 47parallel
Strand 5
C
243 247parallel
Strand 6
C
274 279parallel
Strand 7
C
298 303parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
180 182first strand
Strand 2
D
201 204parallel
Strand 3
D
158 161parallel
Strand 4
D
43 47parallel
Strand 5
D
243 247parallel
Strand 6
D
275 279parallel
Strand 7
D
302 303parallel
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