Analysis of interatomic Contacts of Structural Units in PDB entry:
9R11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R11 entry

There are 2 chains in PDB entry 9R11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 530ILE 710
A
 MET 531ILE 710
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 9R11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
539 543Right-handed 310
Helix 2
AA2
B
670 673Right-handed 310
Helix 3
AA3
A
539 543Right-handed 310
Helix 4
AA4
A
670 673Right-handed 310
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There are 4 sheets in PDB entry 9R11. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
547 549first strand
Strand 2
B
555 558anti-parallel
Strand 3
B
697 701anti-parallel
Strand 4
B
590 596anti-parallel
Strand 5
B
653 659anti-parallel
Strand 6
B
664 669anti-parallel
Strand 7
B
674 680anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
578 581first strand
Strand 2
B
687 693anti-parallel
Strand 3
B
602 609anti-parallel
Strand 4
B
624 630anti-parallel
Strand 5
B
633 638anti-parallel
Strand 6
B
641 644anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 549first strand
Strand 2
A
555 558anti-parallel
Strand 3
A
697 704anti-parallel
Strand 4
A
590 596anti-parallel
Strand 5
A
653 659anti-parallel
Strand 6
A
664 669anti-parallel
Strand 7
A
674 680anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 581first strand
Strand 2
A
687 693anti-parallel
Strand 3
A
602 609anti-parallel
Strand 4
A
624 630anti-parallel
Strand 5
A
633 638anti-parallel
Strand 6
A
641 644anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il