Analysis of interatomic Contacts of Structural Units in PDB entry:
9R19

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9R19 entry

There are 3 chains in PDB entry 9R19 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 19	ASP 615
B	THR 20	ALA 614
C	THR 20	ASN 51

There are127 helices in PDB entry 9R19. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	53	Right-handed alpha
Helix 2	AA2	A	55	81	Right-handed alpha
Helix 3	AA3	A	82	83	Right-handed 310
Helix 4	AA4	A	84	88	Right-handed 310
Helix 5	AA5	A	90	101	Right-handed alpha
Helix 6	AA6	A	103	108	Right-handed 310
Helix 7	AA7	A	109	130	Right-handed alpha
Helix 8	AA8	A	146	155	Right-handed alpha
Helix 9	AA9	A	157	172	Right-handed alpha
Helix 10	AB1	A	172	194	Right-handed alpha
Helix 11	AB2	A	198	205	Right-handed alpha
Helix 12	AB3	A	206	208	Right-handed 310
Helix 13	AB4	A	218	252	Right-handed alpha
Helix 14	AB5	A	265	267	Right-handed 310
Helix 15	AB6	A	275	277	Right-handed 310
Helix 16	AB7	A	278	283	Right-handed alpha
Helix 17	AB8	A	293	300	Right-handed alpha
Helix 18	AB9	A	303	318	Right-handed alpha
Helix 19	AC1	A	324	331	Right-handed alpha
Helix 20	AC2	A	365	385	Right-handed alpha
Helix 21	AC3	A	386	388	Right-handed 310
Helix 22	AC4	A	389	393	Right-handed 310
Helix 23	AC5	A	397	414	Right-handed alpha
Helix 24	AC6	A	414	421	Right-handed alpha
Helix 25	AC7	A	431	447	Right-handed alpha
Helix 26	AC8	A	448	466	Right-handed alpha
Helix 27	AC9	A	469	471	Right-handed 310
Helix 28	AD1	A	472	484	Right-handed alpha
Helix 29	AD2	A	499	502	Right-handed 310
Helix 30	AD3	A	503	508	Right-handed alpha
Helix 31	AD4	A	513	533	Right-handed alpha
Helix 32	AD5	A	538	542	Right-handed 310
Helix 33	AD6	A	547	559	Right-handed alpha
Helix 34	AD7	A	565	575	Right-handed alpha
Helix 35	AD8	A	581	588	Right-handed alpha
Helix 36	AD9	A	588	599	Right-handed alpha
Helix 37	AE1	B	21	52	Right-handed alpha
Helix 38	AE2	B	55	81	Right-handed alpha
Helix 39	AE3	B	82	83	Right-handed 310
Helix 40	AE4	B	84	88	Right-handed 310
Helix 41	AE5	B	90	101	Right-handed alpha
Helix 42	AE6	B	103	108	Right-handed 310
Helix 43	AE7	B	109	130	Right-handed alpha
Helix 44	AE8	B	146	155	Right-handed alpha
Helix 45	AE9	B	157	172	Right-handed alpha
Helix 46	AF1	B	172	194	Right-handed alpha
Helix 47	AF2	B	198	205	Right-handed alpha
Helix 48	AF3	B	206	208	Right-handed 310
Helix 49	AF4	B	218	252	Right-handed alpha
Helix 50	AF5	B	265	267	Right-handed 310
Helix 51	AF6	B	275	277	Right-handed 310
Helix 52	AF7	B	278	283	Right-handed alpha
Helix 53	AF8	B	293	300	Right-handed alpha
Helix 54	AF9	B	303	318	Right-handed alpha
Helix 55	AG1	B	324	331	Right-handed alpha
Helix 56	AG2	B	365	385	Right-handed alpha
Helix 57	AG3	B	386	388	Right-handed 310
Helix 58	AG4	B	389	393	Right-handed 310
Helix 59	AG5	B	397	413	Right-handed alpha
Helix 60	AG6	B	414	421	Right-handed alpha
Helix 61	AG7	B	431	447	Right-handed alpha
Helix 62	AG8	B	448	466	Right-handed alpha
Helix 63	AG9	B	469	471	Right-handed 310
Helix 64	AH1	B	472	484	Right-handed alpha
Helix 65	AH2	B	499	502	Right-handed 310
Helix 66	AH3	B	503	508	Right-handed alpha
Helix 67	AH4	B	513	533	Right-handed alpha
Helix 68	AH5	B	538	542	Right-handed 310
Helix 69	AH6	B	547	559	Right-handed alpha
Helix 70	AH7	B	565	575	Right-handed alpha
Helix 71	AH8	B	581	588	Right-handed alpha
Helix 72	AH9	B	588	599	Right-handed alpha
Helix 73	AI1	C	21	53	Right-handed alpha
Helix 74	AI2	C	55	81	Right-handed alpha
Helix 75	AI3	C	82	83	Right-handed 310
Helix 76	AI4	C	84	88	Right-handed 310
Helix 77	AI5	C	90	101	Right-handed alpha
Helix 78	AI6	C	103	108	Right-handed 310
Helix 79	AI7	C	109	130	Right-handed alpha
Helix 80	AI8	C	146	155	Right-handed alpha
Helix 81	AI9	C	157	172	Right-handed alpha
Helix 82	AJ1	C	172	194	Right-handed alpha
Helix 83	AJ2	C	198	205	Right-handed alpha
Helix 84	AJ3	C	206	208	Right-handed 310
Helix 85	AJ4	C	218	252	Right-handed alpha
Helix 86	AJ5	C	265	267	Right-handed 310
Helix 87	AJ6	C	275	277	Right-handed 310
Helix 88	AJ7	C	278	283	Right-handed alpha
Helix 89	AJ8	C	293	300	Right-handed alpha
Helix 90	AJ9	C	303	318	Right-handed alpha
Helix 91	AK1	C	324	331	Right-handed alpha
Helix 92	AK2	C	365	385	Right-handed alpha
Helix 93	AK3	C	386	388	Right-handed 310
Helix 94	AK4	C	389	393	Right-handed 310
Helix 95	AK5	C	397	414	Right-handed alpha
Helix 96	AK6	C	414	421	Right-handed alpha
Helix 97	AK7	C	431	447	Right-handed alpha
Helix 98	AK8	C	448	466	Right-handed alpha
Helix 99	AK9	C	469	471	Right-handed 310
Helix 100	AL1	C	472	484	Right-handed alpha
Helix 101	AL2	C	499	502	Right-handed 310
Helix 102	AL3	C	503	508	Right-handed alpha
Helix 103	AL4	C	513	533	Right-handed alpha
Helix 104	AL5	C	538	542	Right-handed 310
Helix 105	AL6	C	547	559	Right-handed alpha
Helix 106	AL7	C	565	575	Right-handed alpha
Helix 107	AL8	C	581	588	Right-handed alpha
Helix 108	AL9	C	588	599	Right-handed alpha
Helix 109	AM1	C	600	602	Right-handed 310
Helix 110	AM2	D	28	32	Right-handed 310
Helix 111	AM3	D	87	91	Right-handed 310
Helix 112	AM4	D	109	111	Right-handed 310
Helix 113	AM5	E	28	32	Right-handed 310
Helix 114	AM6	E	87	91	Right-handed 310
Helix 115	AM7	E	109	111	Right-handed 310
Helix 116	AM8	F	28	32	Right-handed 310
Helix 117	AM9	F	87	91	Right-handed 310
Helix 118	AN1	F	109	111	Right-handed 310
Helix 119	AN2	G	25	32	Right-handed alpha
Helix 120	AN3	G	86	90	Right-handed 310
Helix 121	AN4	G	97	103	Right-handed alpha
Helix 122	AN5	H	25	32	Right-handed alpha
Helix 123	AN6	H	86	90	Right-handed 310
Helix 124	AN7	H	97	103	Right-handed alpha
Helix 125	AN8	I	25	32	Right-handed alpha
Helix 126	AN9	I	86	90	Right-handed 310
Helix 127	AO1	I	97	104	Right-handed alpha

There are 24 sheets in PDB entry 9R19. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	134	first strand
Strand 2	A	137	143	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	487	488	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	352	first strand
Strand 2	A	355	359	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	134	first strand
Strand 2	B	137	143	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	263	first strand
Strand 2	B	487	488	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	350	first strand
Strand 2	B	356	359	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	134	first strand
Strand 2	C	137	143	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	359	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	7	first strand
Strand 2	D	18	24	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	120	125	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	58	60	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	120	125	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	113	116	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	18	24	anti-parallel
Strand 3	E	78	83	anti-parallel
Strand 4	E	68	73	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	13	first strand
Strand 2	E	120	125	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	46	51	anti-parallel
Strand 6	E	58	60	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	13	first strand
Strand 2	E	120	125	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	113	116	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	18	24	anti-parallel
Strand 3	F	78	83	anti-parallel
Strand 4	F	68	73	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	45	51	anti-parallel
Strand 3	F	34	39	anti-parallel
Strand 4	F	92	99	anti-parallel
Strand 5	F	113	116	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	45	51	anti-parallel
Strand 3	F	34	39	anti-parallel
Strand 4	F	92	99	anti-parallel
Strand 5	F	120	122	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	7	first strand
Strand 2	G	17	23	anti-parallel
Strand 3	G	77	83	anti-parallel
Strand 4	G	67	72	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	110	114	parallel
Strand 3	G	91	96	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	45	51	anti-parallel
Strand 6	G	57	58	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	7	first strand
Strand 2	H	17	23	anti-parallel
Strand 3	H	77	83	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	110	114	parallel
Strand 3	H	91	96	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	58	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	5	7	first strand
Strand 2	I	17	23	anti-parallel
Strand 3	I	77	83	anti-parallel
Strand 4	I	69	72	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	110	114	parallel
Strand 3	I	91	96	anti-parallel
Strand 4	I	34	39	anti-parallel
Strand 5	I	45	51	anti-parallel
Strand 6	I	57	58	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9R19

Analysis of interatomic Contacts of Structural Units in PDB entry:
9R19