Analysis of interatomic Contacts of Structural Units in PDB entry:
9R1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R1G entry

There are 3 chains in PDB entry 9R1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 28VAL 567
H
 VAL 2LYS 225
L
 ASP 1ARG 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9R1G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 62Right-handed alpha
Helix 2
AA2
A
63 66Right-handed 310
Helix 3
AA3
A
68 85Right-handed alpha
Helix 4
AA4
A
85 93Right-handed alpha
Helix 5
AA5
A
95 105Right-handed alpha
Helix 6
AA6
A
110 126Right-handed alpha
Helix 7
AA7
A
126 136Right-handed alpha
Helix 8
AA8
A
136 144Right-handed alpha
Helix 9
AA9
A
147 161Right-handed alpha
Helix 10
AB1
A
163 180Right-handed alpha
Helix 11
AB2
A
184 207Right-handed alpha
Helix 12
AB3
A
212 238Right-handed alpha
Helix 13
AB4
A
249 254Right-handed 310
Helix 14
AB5
A
255 269Right-handed alpha
Helix 15
AB6
A
270 275Right-handed alpha
Helix 16
AB7
A
275 285Right-handed alpha
Helix 17
AB8
A
288 307Right-handed alpha
Helix 18
AB9
A
308 327Right-handed alpha
Helix 19
AC1
A
328 357Right-handed alpha
Helix 20
AC2
A
360 366Right-handed alpha
Helix 21
AC3
A
368 403Right-handed alpha
Helix 22
AC4
A
404 418Right-handed alpha
Helix 23
AC5
A
420 430Right-handed alpha
Helix 24
AC6
A
434 459Right-handed alpha
Helix 25
AC7
A
461 473Right-handed alpha
Helix 26
AC8
A
538 567Right-handed alpha
Helix 27
AC9
H
84 88Right-handed 310
Helix 28
AD1
H
102 107Right-handed alpha
Helix 29
AD2
H
167 169Right-handed 310
Helix 30
AD3
H
197 203Right-handed alpha
Helix 31
AD4
L
121 128Right-handed alpha
Helix 32
AD5
L
183 189Right-handed alpha
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There are 9 sheets in PDB entry 9R1G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
17 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
118 122parallel
Strand 3
H
89 95anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
131 134first strand
Strand 2
H
147 156anti-parallel
Strand 3
H
187 195anti-parallel
Strand 4
H
174 176anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
131 134first strand
Strand 2
H
147 156anti-parallel
Strand 3
H
187 195anti-parallel
Strand 4
H
180 181anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
162 165first strand
Strand 2
H
205 210anti-parallel
Strand 3
H
219 222anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
5 6first strand
Strand 2
L
19 24anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
85 87anti-parallel
Strand 4
L
35 38anti-parallel
Strand 5
L
45 49anti-parallel
Strand 6
L
53 54anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 118first strand
Strand 2
L
129 139anti-parallel
Strand 3
L
173 182anti-parallel
Strand 4
L
159 163anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
153 154first strand
Strand 2
L
145 150anti-parallel
Strand 3
L
191 197anti-parallel
Strand 4
L
205 210anti-parallel
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