Analysis of interatomic Contacts of Structural Units in PDB entry:
9R33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R33 entry

There are 3 chains in PDB entry 9R33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 107PRO 261
B
 PRO 109PRO 261
C
 HIS 106PRO 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9R33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
109 113Right-handed 310
Helix 2
AA2
A
120 156Right-handed alpha
Helix 3
AA3
A
161 172Right-handed alpha
Helix 4
AA4
A
174 195Right-handed alpha
Helix 5
AA5
B
120 156Right-handed alpha
Helix 6
AA6
B
158 160Right-handed 310
Helix 7
AA7
B
161 172Right-handed alpha
Helix 8
AA8
B
174 196Right-handed alpha
Helix 9
AA9
C
109 114Right-handed 310
Helix 10
AB1
C
120 156Right-handed alpha
Helix 11
AB2
C
161 172Right-handed alpha
Helix 12
AB3
C
174 195Right-handed alpha
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There are 4 sheets in PDB entry 9R33. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 158first strand
Strand 2
A
197 211anti-parallel
Strand 3
A
215 228anti-parallel
Strand 4
A
232 233anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 158first strand
Strand 2
A
197 211anti-parallel
Strand 3
A
215 228anti-parallel
Strand 4
A
237 248anti-parallel
Strand 5
A
251 259anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 211first strand
Strand 2
B
215 226anti-parallel
Strand 3
B
237 248anti-parallel
Strand 4
B
251 259anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
199 211first strand
Strand 2
C
215 226anti-parallel
Strand 3
C
237 248anti-parallel
Strand 4
C
251 259anti-parallel
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