Analysis of interatomic Contacts of Structural Units in PDB entry:
9R51

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9R51 entry

There are 4 chains in PDB entry 9R51 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	HIS 393
B	MET 1	TYR 282
C	VAL 2	GLU 241
D	GLY 2	GLU 378

There are176 helices in PDB entry 9R51. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	47	Right-handed alpha
Helix 2	AA2	A	53	61	Right-handed alpha
Helix 3	AA3	A	66	83	Right-handed alpha
Helix 4	AA4	A	87	118	Right-handed alpha
Helix 5	AA5	A	119	121	Right-handed 310
Helix 6	AA6	A	122	146	Right-handed alpha
Helix 7	AA7	A	164	195	Right-handed alpha
Helix 8	AA8	A	224	228	Right-handed 310
Helix 9	AA9	A	229	231	Right-handed 310
Helix 10	AB1	A	237	241	Right-handed 310
Helix 11	AB2	A	243	248	Right-handed alpha
Helix 12	AB3	A	265	274	Right-handed alpha
Helix 13	AB4	A	281	306	Right-handed alpha
Helix 14	AB5	A	356	369	Right-handed alpha
Helix 15	AB6	A	373	375	Right-handed 310
Helix 16	AB7	A	376	384	Right-handed alpha
Helix 17	AB8	A	387	393	Right-handed alpha
Helix 18	AB9	B	17	24	Right-handed alpha
Helix 19	AC1	B	28	40	Right-handed alpha
Helix 20	AC2	B	64	71	Right-handed alpha
Helix 21	AC3	B	80	83	Right-handed 310
Helix 22	AC4	B	84	90	Right-handed alpha
Helix 23	AC5	B	102	115	Right-handed alpha
Helix 24	AC6	B	122	124	Right-handed 310
Helix 25	AC7	B	139	150	Right-handed alpha
Helix 26	AC8	B	154	156	Right-handed 310
Helix 27	AC9	B	183	189	Right-handed 310
Helix 28	AD1	B	190	196	Right-handed 310
Helix 29	AD2	B	224	237	Right-handed alpha
Helix 30	AD3	B	246	248	Right-handed 310
Helix 31	AD4	B	251	277	Right-handed alpha
Helix 32	AD5	C	13	21	Right-handed alpha
Helix 33	AD6	C	24	33	Right-handed alpha
Helix 34	AD7	C	78	91	Right-handed alpha
Helix 35	AD8	C	99	104	Right-handed alpha
Helix 36	AD9	C	105	111	Right-handed 310
Helix 37	AE1	C	126	130	Right-handed 310
Helix 38	AE2	C	143	157	Right-handed alpha
Helix 39	AE3	C	158	169	Right-handed alpha
Helix 40	AE4	C	176	183	Right-handed alpha
Helix 41	AE5	C	193	199	Right-handed alpha
Helix 42	AE6	C	215	218	Right-handed 310
Helix 43	AE7	C	222	228	Right-handed alpha
Helix 44	AE8	C	234	239	Right-handed 310
Helix 45	AE9	D	42	47	Right-handed alpha
Helix 46	AF1	D	53	61	Right-handed alpha
Helix 47	AF2	D	66	83	Right-handed alpha
Helix 48	AF3	D	87	118	Right-handed alpha
Helix 49	AF4	D	119	121	Right-handed 310
Helix 50	AF5	D	122	146	Right-handed alpha
Helix 51	AF6	D	164	195	Right-handed alpha
Helix 52	AF7	D	224	228	Right-handed 310
Helix 53	AF8	D	229	231	Right-handed 310
Helix 54	AF9	D	237	241	Right-handed 310
Helix 55	AG1	D	243	248	Right-handed alpha
Helix 56	AG2	D	265	275	Right-handed alpha
Helix 57	AG3	D	280	306	Right-handed alpha
Helix 58	AG4	D	356	369	Right-handed alpha
Helix 59	AG5	D	373	375	Right-handed 310
Helix 60	AG6	D	376	384	Right-handed alpha
Helix 61	AG7	D	387	393	Right-handed alpha
Helix 62	AG8	E	13	21	Right-handed alpha
Helix 63	AG9	E	24	33	Right-handed alpha
Helix 64	AH1	E	78	91	Right-handed alpha
Helix 65	AH2	E	99	105	Right-handed alpha
Helix 66	AH3	E	106	111	Right-handed 310
Helix 67	AH4	E	126	130	Right-handed 310
Helix 68	AH5	E	143	157	Right-handed alpha
Helix 69	AH6	E	158	169	Right-handed alpha
Helix 70	AH7	E	176	183	Right-handed alpha
Helix 71	AH8	E	193	199	Right-handed alpha
Helix 72	AH9	E	215	218	Right-handed 310
Helix 73	AI1	E	222	228	Right-handed alpha
Helix 74	AI2	E	234	239	Right-handed 310
Helix 75	AI3	F	17	24	Right-handed alpha
Helix 76	AI4	F	28	40	Right-handed alpha
Helix 77	AI5	F	64	71	Right-handed alpha
Helix 78	AI6	F	80	83	Right-handed 310
Helix 79	AI7	F	84	90	Right-handed alpha
Helix 80	AI8	F	102	115	Right-handed alpha
Helix 81	AI9	F	122	124	Right-handed 310
Helix 82	AJ1	F	139	150	Right-handed alpha
Helix 83	AJ2	F	154	156	Right-handed 310
Helix 84	AJ3	F	183	189	Right-handed 310
Helix 85	AJ4	F	190	196	Right-handed 310
Helix 86	AJ5	F	224	237	Right-handed alpha
Helix 87	AJ6	F	246	248	Right-handed 310
Helix 88	AJ7	F	251	277	Right-handed alpha
Helix 89	AJ8	G	42	48	Right-handed alpha
Helix 90	AJ9	G	53	61	Right-handed alpha
Helix 91	AK1	G	66	83	Right-handed alpha
Helix 92	AK2	G	87	118	Right-handed alpha
Helix 93	AK3	G	119	121	Right-handed 310
Helix 94	AK4	G	122	146	Right-handed alpha
Helix 95	AK5	G	164	195	Right-handed alpha
Helix 96	AK6	G	224	228	Right-handed 310
Helix 97	AK7	G	229	231	Right-handed 310
Helix 98	AK8	G	237	241	Right-handed 310
Helix 99	AK9	G	243	248	Right-handed alpha
Helix 100	AL1	G	265	274	Right-handed alpha
Helix 101	AL2	G	280	306	Right-handed alpha
Helix 102	AL3	G	356	369	Right-handed alpha
Helix 103	AL4	G	373	375	Right-handed 310
Helix 104	AL5	G	376	384	Right-handed alpha
Helix 105	AL6	G	387	393	Right-handed alpha
Helix 106	AL7	H	13	21	Right-handed alpha
Helix 107	AL8	H	24	33	Right-handed alpha
Helix 108	AL9	H	78	91	Right-handed alpha
Helix 109	AM1	H	99	105	Right-handed alpha
Helix 110	AM2	H	106	111	Right-handed 310
Helix 111	AM3	H	126	130	Right-handed 310
Helix 112	AM4	H	143	156	Right-handed alpha
Helix 113	AM5	H	158	169	Right-handed alpha
Helix 114	AM6	H	176	183	Right-handed alpha
Helix 115	AM7	H	193	199	Right-handed alpha
Helix 116	AM8	H	215	218	Right-handed 310
Helix 117	AM9	H	222	228	Right-handed alpha
Helix 118	AN1	H	234	239	Right-handed 310
Helix 119	AN2	I	17	24	Right-handed alpha
Helix 120	AN3	I	28	40	Right-handed alpha
Helix 121	AN4	I	64	71	Right-handed alpha
Helix 122	AN5	I	80	83	Right-handed 310
Helix 123	AN6	I	84	90	Right-handed alpha
Helix 124	AN7	I	102	115	Right-handed alpha
Helix 125	AN8	I	122	124	Right-handed 310
Helix 126	AN9	I	139	150	Right-handed alpha
Helix 127	AO1	I	154	156	Right-handed 310
Helix 128	AO2	I	183	189	Right-handed 310
Helix 129	AO3	I	190	196	Right-handed 310
Helix 130	AO4	I	224	237	Right-handed alpha
Helix 131	AO5	I	246	248	Right-handed 310
Helix 132	AO6	I	251	277	Right-handed alpha
Helix 133	AO7	J	42	47	Right-handed alpha
Helix 134	AO8	J	53	61	Right-handed alpha
Helix 135	AO9	J	66	83	Right-handed alpha
Helix 136	AP1	J	87	118	Right-handed alpha
Helix 137	AP2	J	119	121	Right-handed 310
Helix 138	AP3	J	122	146	Right-handed alpha
Helix 139	AP4	J	164	195	Right-handed alpha
Helix 140	AP5	J	224	228	Right-handed 310
Helix 141	AP6	J	229	231	Right-handed 310
Helix 142	AP7	J	237	241	Right-handed 310
Helix 143	AP8	J	243	248	Right-handed alpha
Helix 144	AP9	J	265	275	Right-handed alpha
Helix 145	AQ1	J	280	306	Right-handed alpha
Helix 146	AQ2	J	356	369	Right-handed alpha
Helix 147	AQ3	J	373	375	Right-handed 310
Helix 148	AQ4	J	376	384	Right-handed alpha
Helix 149	AQ5	J	387	393	Right-handed alpha
Helix 150	AQ6	K	13	21	Right-handed alpha
Helix 151	AQ7	K	24	33	Right-handed alpha
Helix 152	AQ8	K	78	91	Right-handed alpha
Helix 153	AQ9	K	99	105	Right-handed alpha
Helix 154	AR1	K	106	111	Right-handed 310
Helix 155	AR2	K	126	130	Right-handed 310
Helix 156	AR3	K	143	157	Right-handed alpha
Helix 157	AR4	K	158	169	Right-handed alpha
Helix 158	AR5	K	176	183	Right-handed alpha
Helix 159	AR6	K	193	199	Right-handed alpha
Helix 160	AR7	K	215	218	Right-handed 310
Helix 161	AR8	K	222	228	Right-handed alpha
Helix 162	AR9	K	234	239	Right-handed 310
Helix 163	AS1	L	17	24	Right-handed alpha
Helix 164	AS2	L	28	40	Right-handed alpha
Helix 165	AS3	L	64	72	Right-handed alpha
Helix 166	AS4	L	80	83	Right-handed 310
Helix 167	AS5	L	84	90	Right-handed alpha
Helix 168	AS6	L	102	115	Right-handed alpha
Helix 169	AS7	L	122	124	Right-handed 310
Helix 170	AS8	L	139	150	Right-handed alpha
Helix 171	AS9	L	154	156	Right-handed 310
Helix 172	AT1	L	183	189	Right-handed 310
Helix 173	AT2	L	190	196	Right-handed 310
Helix 174	AT3	L	224	237	Right-handed alpha
Helix 175	AT4	L	246	248	Right-handed 310
Helix 176	AT5	L	251	277	Right-handed alpha

There are 39 sheets in PDB entry 9R51. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	36	first strand
Strand 2	A	17	23	anti-parallel
Strand 3	A	3	8	anti-parallel
Strand 4	C	54	59	parallel
Strand 5	C	46	50	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	155	first strand
Strand 2	A	158	159	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	215	first strand
Strand 2	A	262	263	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	236	first strand
Strand 2	A	254	257	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	332	first strand
Strand 2	A	335	343	anti-parallel
Strand 3	A	349	355	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	62	first strand
Strand 2	B	45	51	anti-parallel
Strand 3	B	97	101	parallel
Strand 4	B	126	132	parallel
Strand 5	B	206	209	parallel
Strand 6	B	218	222	anti-parallel
Strand 7	B	9	15	anti-parallel
Strand 8	B	240	244	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	164	first strand
Strand 2	B	167	172	anti-parallel
Strand 3	B	177	181	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	37	first strand
Strand 2	C	3	8	parallel
Strand 3	C	65	71	parallel
Strand 4	C	92	98	parallel
Strand 5	C	135	137	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	75	first strand
Strand 2	C	124	125	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	207	first strand
Strand 2	C	210	213	anti-parallel

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There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	36	first strand
Strand 2	D	17	23	anti-parallel
Strand 3	D	3	8	anti-parallel
Strand 4	E	54	59	parallel
Strand 5	E	46	50	anti-parallel
Strand 6	K	46	50	anti-parallel
Strand 7	K	54	59	anti-parallel
Strand 8	J	3	8	parallel
Strand 9	J	17	23	anti-parallel
Strand 10	J	29	36	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	155	first strand
Strand 2	D	158	159	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	215	first strand
Strand 2	D	262	263	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	233	236	first strand
Strand 2	D	254	257	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	332	first strand
Strand 2	D	335	343	anti-parallel
Strand 3	D	349	355	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	38	first strand
Strand 2	E	3	8	parallel
Strand 3	E	65	71	parallel
Strand 4	E	92	98	parallel
Strand 5	E	135	137	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	75	first strand
Strand 2	E	124	125	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	204	207	first strand
Strand 2	E	210	213	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	57	62	first strand
Strand 2	F	45	51	anti-parallel
Strand 3	F	97	101	parallel
Strand 4	F	126	132	parallel
Strand 5	F	206	209	parallel
Strand 6	F	218	222	anti-parallel
Strand 7	F	9	15	anti-parallel
Strand 8	F	240	244	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	164	first strand
Strand 2	F	167	172	anti-parallel
Strand 3	F	177	181	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	36	first strand
Strand 2	G	17	23	anti-parallel
Strand 3	G	3	8	anti-parallel
Strand 4	H	54	59	parallel
Strand 5	H	46	51	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	154	155	first strand
Strand 2	G	158	159	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	214	215	first strand
Strand 2	G	262	263	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	233	236	first strand
Strand 2	G	254	257	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	326	332	first strand
Strand 2	G	335	343	anti-parallel
Strand 3	G	349	355	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	38	first strand
Strand 2	H	3	8	parallel
Strand 3	H	65	71	parallel
Strand 4	H	92	98	parallel
Strand 5	H	135	137	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	74	75	first strand
Strand 2	H	124	125	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	204	207	first strand
Strand 2	H	210	213	anti-parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	57	62	first strand
Strand 2	I	45	51	anti-parallel
Strand 3	I	97	101	parallel
Strand 4	I	126	132	parallel
Strand 5	I	206	209	parallel
Strand 6	I	218	222	anti-parallel
Strand 7	I	9	15	anti-parallel
Strand 8	I	240	244	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	158	164	first strand
Strand 2	I	167	172	anti-parallel
Strand 3	I	177	181	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	154	155	first strand
Strand 2	J	158	159	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	214	215	first strand
Strand 2	J	262	263	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	233	236	first strand
Strand 2	J	254	257	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	326	332	first strand
Strand 2	J	335	343	anti-parallel
Strand 3	J	349	355	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	34	37	first strand
Strand 2	K	3	8	parallel
Strand 3	K	65	71	parallel
Strand 4	K	92	98	parallel
Strand 5	K	135	137	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	74	75	first strand
Strand 2	K	124	125	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	204	207	first strand
Strand 2	K	210	213	anti-parallel

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There are 8 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	57	62	first strand
Strand 2	L	45	51	anti-parallel
Strand 3	L	97	101	parallel
Strand 4	L	126	132	parallel
Strand 5	L	206	209	parallel
Strand 6	L	218	222	anti-parallel
Strand 7	L	9	15	anti-parallel
Strand 8	L	240	244	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	158	164	first strand
Strand 2	L	167	172	anti-parallel
Strand 3	L	177	181	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9R51

Analysis of interatomic Contacts of Structural Units in PDB entry:
9R51