Analysis of interatomic Contacts of Structural Units in PDB entry:
9R6H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9R6H entry

There are 4 chains in PDB entry 9R6H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 0	LEU 64
A	VAL 66	LYS 478
B	SER 2	LEU 64
B	VAL 66	LYS 478

There are 18 helices in PDB entry 9R6H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	9	Right-handed 310
Helix 2	AA2	A	56	61	Right-handed 310
Helix 3	AA3	A	66	70	Right-handed 310
Helix 4	AA4	A	76	80	Right-handed 310
Helix 5	AA5	A	309	316	Right-handed alpha
Helix 6	AA6	A	319	325	Right-handed alpha
Helix 7	AA7	A	333	356	Right-handed alpha
Helix 8	AA8	A	449	453	Right-handed 310
Helix 9	AA9	B	5	9	Right-handed 310
Helix 10	AB1	B	56	61	Right-handed 310
Helix 11	AB2	B	66	70	Right-handed 310
Helix 12	AB3	B	73	79	Right-handed 310
Helix 13	AB4	B	80	85	Right-handed alpha
Helix 14	AB5	B	309	316	Right-handed alpha
Helix 15	AB6	B	319	326	Right-handed alpha
Helix 16	AB7	B	333	354	Right-handed alpha
Helix 17	AB8	B	390	394	Right-handed 310
Helix 18	AB9	B	449	453	Right-handed 310

There are 10 sheets in PDB entry 9R6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	22	first strand
Strand 2	A	25	36	anti-parallel
Strand 3	A	41	48	anti-parallel
Strand 4	A	215	226	anti-parallel
Strand 5	A	197	206	anti-parallel
Strand 6	A	147	153	anti-parallel
Strand 7	A	158	168	anti-parallel
Strand 8	A	174	185	anti-parallel
Strand 9	A	90	98	anti-parallel
Strand 10	A	103	113	anti-parallel
Strand 11	A	116	126	anti-parallel
Strand 12	A	11	22	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	281	first strand
Strand 2	A	265	272	anti-parallel
Strand 3	A	249	260	anti-parallel
Strand 4	A	301	305	parallel
Strand 5	A	293	296	anti-parallel
Strand 6	A	285	290	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	369	first strand
Strand 2	A	380	387	anti-parallel
Strand 3	A	440	445	anti-parallel
Strand 4	A	430	435	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	374	first strand
Strand 2	A	471	475	parallel
Strand 3	A	454	461	anti-parallel
Strand 4	A	396	401	anti-parallel
Strand 5	A	407	413	anti-parallel
Strand 6	A	420	422	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	374	first strand
Strand 2	A	471	475	parallel
Strand 3	A	454	461	anti-parallel
Strand 4	A	465	467	anti-parallel

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There are 12 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	22	first strand
Strand 2	B	25	36	anti-parallel
Strand 3	B	41	48	anti-parallel
Strand 4	B	215	226	anti-parallel
Strand 5	B	197	206	anti-parallel
Strand 6	B	147	153	anti-parallel
Strand 7	B	158	168	anti-parallel
Strand 8	B	174	185	anti-parallel
Strand 9	B	90	98	anti-parallel
Strand 10	B	103	113	anti-parallel
Strand 11	B	116	126	anti-parallel
Strand 12	B	11	22	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	281	first strand
Strand 2	B	265	272	anti-parallel
Strand 3	B	248	260	anti-parallel
Strand 4	B	300	304	parallel
Strand 5	B	293	296	anti-parallel
Strand 6	B	285	288	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	365	369	first strand
Strand 2	B	380	387	anti-parallel
Strand 3	B	440	445	anti-parallel
Strand 4	B	430	435	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	374	first strand
Strand 2	B	471	475	parallel
Strand 3	B	454	461	anti-parallel
Strand 4	B	397	401	anti-parallel
Strand 5	B	408	413	anti-parallel
Strand 6	B	420	422	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	374	first strand
Strand 2	B	471	475	parallel
Strand 3	B	454	461	anti-parallel
Strand 4	B	465	467	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9R6H

Analysis of interatomic Contacts of Structural Units in PDB entry:
9R6H