Analysis of interatomic Contacts of Structural Units in PDB entry:
9R6Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9R6Z entry

There are 4 chains in PDB entry 9R6Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	HIS 393
B	MET 1	TYR 282
C	VAL 2	GLU 241
D	GLY 2	GLU 378

There are180 helices in PDB entry 9R6Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	47	Right-handed alpha
Helix 2	AA2	A	51	53	Right-handed 310
Helix 3	AA3	A	54	60	Right-handed alpha
Helix 4	AA4	A	61	63	Right-handed 310
Helix 5	AA5	A	66	83	Right-handed alpha
Helix 6	AA6	A	87	113	Right-handed alpha
Helix 7	AA7	A	113	118	Right-handed alpha
Helix 8	AA8	A	119	121	Right-handed 310
Helix 9	AA9	A	122	146	Right-handed alpha
Helix 10	AB1	A	164	195	Right-handed alpha
Helix 11	AB2	A	224	228	Right-handed 310
Helix 12	AB3	A	229	231	Right-handed 310
Helix 13	AB4	A	237	241	Right-handed 310
Helix 14	AB5	A	243	248	Right-handed alpha
Helix 15	AB6	A	265	275	Right-handed alpha
Helix 16	AB7	A	280	306	Right-handed alpha
Helix 17	AB8	A	356	369	Right-handed alpha
Helix 18	AB9	A	373	375	Right-handed 310
Helix 19	AC1	A	376	384	Right-handed alpha
Helix 20	AC2	A	387	393	Right-handed alpha
Helix 21	AC3	B	17	24	Right-handed alpha
Helix 22	AC4	B	28	40	Right-handed alpha
Helix 23	AC5	B	64	71	Right-handed alpha
Helix 24	AC6	B	80	83	Right-handed 310
Helix 25	AC7	B	84	91	Right-handed alpha
Helix 26	AC8	B	102	115	Right-handed alpha
Helix 27	AC9	B	122	124	Right-handed 310
Helix 28	AD1	B	139	149	Right-handed alpha
Helix 29	AD2	B	154	156	Right-handed 310
Helix 30	AD3	B	183	189	Right-handed 310
Helix 31	AD4	B	190	196	Right-handed 310
Helix 32	AD5	B	224	237	Right-handed alpha
Helix 33	AD6	B	251	277	Right-handed alpha
Helix 34	AD7	C	13	21	Right-handed alpha
Helix 35	AD8	C	23	33	Right-handed alpha
Helix 36	AD9	C	78	91	Right-handed alpha
Helix 37	AE1	C	99	104	Right-handed alpha
Helix 38	AE2	C	105	111	Right-handed 310
Helix 39	AE3	C	126	130	Right-handed 310
Helix 40	AE4	C	143	157	Right-handed alpha
Helix 41	AE5	C	158	169	Right-handed alpha
Helix 42	AE6	C	176	183	Right-handed alpha
Helix 43	AE7	C	193	199	Right-handed alpha
Helix 44	AE8	C	215	218	Right-handed 310
Helix 45	AE9	C	222	228	Right-handed alpha
Helix 46	AF1	C	234	239	Right-handed 310
Helix 47	AF2	D	42	47	Right-handed alpha
Helix 48	AF3	D	53	61	Right-handed alpha
Helix 49	AF4	D	66	83	Right-handed alpha
Helix 50	AF5	D	87	113	Right-handed alpha
Helix 51	AF6	D	113	118	Right-handed alpha
Helix 52	AF7	D	119	121	Right-handed 310
Helix 53	AF8	D	122	146	Right-handed alpha
Helix 54	AF9	D	164	196	Right-handed alpha
Helix 55	AG1	D	224	228	Right-handed 310
Helix 56	AG2	D	229	231	Right-handed 310
Helix 57	AG3	D	237	241	Right-handed 310
Helix 58	AG4	D	243	248	Right-handed alpha
Helix 59	AG5	D	265	274	Right-handed alpha
Helix 60	AG6	D	280	306	Right-handed alpha
Helix 61	AG7	D	356	369	Right-handed alpha
Helix 62	AG8	D	373	375	Right-handed 310
Helix 63	AG9	D	376	384	Right-handed alpha
Helix 64	AH1	D	387	393	Right-handed alpha
Helix 65	AH2	E	17	24	Right-handed alpha
Helix 66	AH3	E	28	40	Right-handed alpha
Helix 67	AH4	E	64	71	Right-handed alpha
Helix 68	AH5	E	80	83	Right-handed 310
Helix 69	AH6	E	84	90	Right-handed alpha
Helix 70	AH7	E	102	115	Right-handed alpha
Helix 71	AH8	E	122	124	Right-handed 310
Helix 72	AH9	E	139	149	Right-handed alpha
Helix 73	AI1	E	154	156	Right-handed 310
Helix 74	AI2	E	183	189	Right-handed 310
Helix 75	AI3	E	190	195	Right-handed 310
Helix 76	AI4	E	224	237	Right-handed alpha
Helix 77	AI5	E	246	248	Right-handed 310
Helix 78	AI6	E	251	277	Right-handed alpha
Helix 79	AI7	F	13	21	Right-handed alpha
Helix 80	AI8	F	22	33	Right-handed alpha
Helix 81	AI9	F	78	91	Right-handed alpha
Helix 82	AJ1	F	99	105	Right-handed alpha
Helix 83	AJ2	F	106	111	Right-handed 310
Helix 84	AJ3	F	126	130	Right-handed 310
Helix 85	AJ4	F	143	157	Right-handed alpha
Helix 86	AJ5	F	158	169	Right-handed alpha
Helix 87	AJ6	F	177	183	Right-handed alpha
Helix 88	AJ7	F	193	199	Right-handed alpha
Helix 89	AJ8	F	215	218	Right-handed 310
Helix 90	AJ9	F	222	228	Right-handed alpha
Helix 91	AK1	F	234	239	Right-handed 310
Helix 92	AK2	G	42	47	Right-handed alpha
Helix 93	AK3	G	51	53	Right-handed 310
Helix 94	AK4	G	54	60	Right-handed alpha
Helix 95	AK5	G	61	63	Right-handed 310
Helix 96	AK6	G	66	83	Right-handed alpha
Helix 97	AK7	G	87	118	Right-handed alpha
Helix 98	AK8	G	119	121	Right-handed 310
Helix 99	AK9	G	122	146	Right-handed alpha
Helix 100	AL1	G	164	196	Right-handed alpha
Helix 101	AL2	G	224	228	Right-handed 310
Helix 102	AL3	G	229	231	Right-handed 310
Helix 103	AL4	G	237	241	Right-handed 310
Helix 104	AL5	G	243	248	Right-handed alpha
Helix 105	AL6	G	265	274	Right-handed alpha
Helix 106	AL7	G	280	306	Right-handed alpha
Helix 107	AL8	G	356	369	Right-handed alpha
Helix 108	AL9	G	373	375	Right-handed 310
Helix 109	AM1	G	376	384	Right-handed alpha
Helix 110	AM2	G	387	393	Right-handed alpha
Helix 111	AM3	H	17	24	Right-handed alpha
Helix 112	AM4	H	28	40	Right-handed alpha
Helix 113	AM5	H	64	71	Right-handed alpha
Helix 114	AM6	H	80	83	Right-handed 310
Helix 115	AM7	H	84	90	Right-handed alpha
Helix 116	AM8	H	102	115	Right-handed alpha
Helix 117	AM9	H	122	124	Right-handed 310
Helix 118	AN1	H	139	150	Right-handed alpha
Helix 119	AN2	H	154	156	Right-handed 310
Helix 120	AN3	H	183	189	Right-handed 310
Helix 121	AN4	H	190	196	Right-handed 310
Helix 122	AN5	H	224	237	Right-handed alpha
Helix 123	AN6	H	251	277	Right-handed alpha
Helix 124	AN7	I	13	21	Right-handed alpha
Helix 125	AN8	I	22	24	Right-handed 310
Helix 126	AN9	I	25	33	Right-handed alpha
Helix 127	AO1	I	78	91	Right-handed alpha
Helix 128	AO2	I	99	105	Right-handed alpha
Helix 129	AO3	I	106	111	Right-handed 310
Helix 130	AO4	I	126	130	Right-handed 310
Helix 131	AO5	I	143	157	Right-handed alpha
Helix 132	AO6	I	158	169	Right-handed alpha
Helix 133	AO7	I	176	183	Right-handed alpha
Helix 134	AO8	I	193	199	Right-handed alpha
Helix 135	AO9	I	222	228	Right-handed alpha
Helix 136	AP1	I	234	239	Right-handed 310
Helix 137	AP2	J	42	47	Right-handed alpha
Helix 138	AP3	J	53	60	Right-handed alpha
Helix 139	AP4	J	61	63	Right-handed 310
Helix 140	AP5	J	66	83	Right-handed alpha
Helix 141	AP6	J	87	113	Right-handed alpha
Helix 142	AP7	J	113	118	Right-handed alpha
Helix 143	AP8	J	122	146	Right-handed alpha
Helix 144	AP9	J	164	196	Right-handed alpha
Helix 145	AQ1	J	224	228	Right-handed 310
Helix 146	AQ2	J	229	231	Right-handed 310
Helix 147	AQ3	J	237	241	Right-handed 310
Helix 148	AQ4	J	243	248	Right-handed alpha
Helix 149	AQ5	J	265	274	Right-handed alpha
Helix 150	AQ6	J	280	306	Right-handed alpha
Helix 151	AQ7	J	356	369	Right-handed alpha
Helix 152	AQ8	J	373	375	Right-handed 310
Helix 153	AQ9	J	376	384	Right-handed alpha
Helix 154	AR1	J	387	393	Right-handed alpha
Helix 155	AR2	K	17	24	Right-handed alpha
Helix 156	AR3	K	28	40	Right-handed alpha
Helix 157	AR4	K	64	71	Right-handed alpha
Helix 158	AR5	K	80	83	Right-handed 310
Helix 159	AR6	K	84	89	Right-handed alpha
Helix 160	AR7	K	102	115	Right-handed alpha
Helix 161	AR8	K	122	124	Right-handed 310
Helix 162	AR9	K	139	149	Right-handed alpha
Helix 163	AS1	K	154	156	Right-handed 310
Helix 164	AS2	K	183	189	Right-handed 310
Helix 165	AS3	K	190	196	Right-handed 310
Helix 166	AS4	K	224	238	Right-handed alpha
Helix 167	AS5	K	251	277	Right-handed alpha
Helix 168	AS6	L	13	21	Right-handed alpha
Helix 169	AS7	L	23	33	Right-handed alpha
Helix 170	AS8	L	78	91	Right-handed alpha
Helix 171	AS9	L	99	105	Right-handed alpha
Helix 172	AT1	L	106	111	Right-handed 310
Helix 173	AT2	L	126	130	Right-handed 310
Helix 174	AT3	L	143	157	Right-handed alpha
Helix 175	AT4	L	158	170	Right-handed alpha
Helix 176	AT5	L	176	183	Right-handed alpha
Helix 177	AT6	L	193	199	Right-handed alpha
Helix 178	AT7	L	215	218	Right-handed 310
Helix 179	AT8	L	222	228	Right-handed alpha
Helix 180	AT9	L	234	239	Right-handed 310

There are 41 sheets in PDB entry 9R6Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	36	first strand
Strand 2	A	17	23	anti-parallel
Strand 3	A	3	7	anti-parallel
Strand 4	C	54	59	parallel
Strand 5	C	46	50	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	155	first strand
Strand 2	A	158	159	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	215	first strand
Strand 2	A	262	263	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	236	first strand
Strand 2	A	254	257	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	332	first strand
Strand 2	A	335	343	anti-parallel
Strand 3	A	349	355	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	62	first strand
Strand 2	B	45	51	anti-parallel
Strand 3	B	97	101	parallel
Strand 4	B	126	132	parallel
Strand 5	B	206	209	parallel
Strand 6	B	218	222	anti-parallel
Strand 7	B	9	15	anti-parallel
Strand 8	B	240	244	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	164	first strand
Strand 2	B	167	172	anti-parallel
Strand 3	B	177	181	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	38	first strand
Strand 2	C	3	8	parallel
Strand 3	C	65	71	parallel
Strand 4	C	92	98	parallel
Strand 5	C	135	137	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	75	first strand
Strand 2	C	124	125	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	207	first strand
Strand 2	C	210	213	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	31	first strand
Strand 2	D	17	23	anti-parallel
Strand 3	D	34	36	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	31	first strand
Strand 2	D	17	23	anti-parallel
Strand 3	D	3	8	anti-parallel
Strand 4	F	54	59	parallel
Strand 5	F	46	50	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	155	first strand
Strand 2	D	158	159	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	215	first strand
Strand 2	D	262	263	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	233	236	first strand
Strand 2	D	254	257	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	332	first strand
Strand 2	D	335	343	anti-parallel
Strand 3	D	349	355	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	62	first strand
Strand 2	E	45	51	anti-parallel
Strand 3	E	97	101	parallel
Strand 4	E	126	132	parallel
Strand 5	E	206	208	parallel
Strand 6	E	218	222	anti-parallel
Strand 7	E	9	15	anti-parallel
Strand 8	E	240	244	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	164	first strand
Strand 2	E	167	172	anti-parallel
Strand 3	E	177	181	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	34	38	first strand
Strand 2	F	3	8	parallel
Strand 3	F	65	71	parallel
Strand 4	F	92	98	parallel
Strand 5	F	135	137	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	74	75	first strand
Strand 2	F	124	125	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	204	207	first strand
Strand 2	F	210	213	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	36	first strand
Strand 2	G	17	23	anti-parallel
Strand 3	G	3	8	anti-parallel
Strand 4	I	54	59	parallel
Strand 5	I	46	50	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	154	155	first strand
Strand 2	G	158	159	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	214	215	first strand
Strand 2	G	262	263	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	233	236	first strand
Strand 2	G	254	257	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	326	332	first strand
Strand 2	G	335	343	anti-parallel
Strand 3	G	349	355	anti-parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	62	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	97	101	parallel
Strand 4	H	126	132	parallel
Strand 5	H	206	209	parallel
Strand 6	H	218	222	anti-parallel
Strand 7	H	9	15	anti-parallel
Strand 8	H	240	244	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	164	first strand
Strand 2	H	167	172	anti-parallel
Strand 3	H	177	181	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	34	37	first strand
Strand 2	I	3	8	parallel
Strand 3	I	65	71	parallel
Strand 4	I	92	98	parallel
Strand 5	I	135	137	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	74	75	first strand
Strand 2	I	124	125	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	204	207	first strand
Strand 2	I	210	213	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	36	first strand
Strand 2	J	17	23	anti-parallel
Strand 3	J	3	8	anti-parallel
Strand 4	L	54	59	parallel
Strand 5	L	46	50	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	154	155	first strand
Strand 2	J	158	159	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	214	215	first strand
Strand 2	J	262	263	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	233	236	first strand
Strand 2	J	254	257	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	326	332	first strand
Strand 2	J	335	343	anti-parallel
Strand 3	J	349	355	anti-parallel

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There are 8 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	57	62	first strand
Strand 2	K	45	51	anti-parallel
Strand 3	K	97	101	parallel
Strand 4	K	126	132	parallel
Strand 5	K	206	209	parallel
Strand 6	K	218	222	anti-parallel
Strand 7	K	9	15	anti-parallel
Strand 8	K	240	244	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	158	164	first strand
Strand 2	K	167	172	anti-parallel
Strand 3	K	177	181	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	34	38	first strand
Strand 2	L	3	8	parallel
Strand 3	L	65	71	parallel
Strand 4	L	92	98	parallel
Strand 5	L	135	137	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	74	75	first strand
Strand 2	L	124	125	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	204	207	first strand
Strand 2	L	210	213	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9R6Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
9R6Z