Analysis of interatomic Contacts of Structural Units in PDB entry:
9R8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R8G entry

There are 2 chains in PDB entry 9R8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 17ARG 996
B
 ASP 13LYS 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9R8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 42Right-handed 310
Helix 2
AA2
A
140 149Right-handed alpha
Helix 3
AA3
A
150 158Right-handed alpha
Helix 4
AA4
A
162 167Right-handed alpha
Helix 5
AA5
A
181 183Right-handed 310
Helix 6
AA6
A
184 189Right-handed alpha
Helix 7
AA7
A
214 221Right-handed alpha
Helix 8
AA8
A
239 260Right-handed alpha
Helix 9
AA9
A
293 316Right-handed alpha
Helix 10
AB1
A
323 335Right-handed alpha
Helix 11
AB2
A
341 351Right-handed alpha
Helix 12
AB3
A
358 365Right-handed alpha
Helix 13
AB4
A
368 404Right-handed alpha
Helix 14
AB5
A
405 411Right-handed 310
Helix 15
AB6
A
416 422Right-handed alpha
Helix 16
AB7
A
428 444Right-handed alpha
Helix 17
AB8
A
445 448Right-handed 310
Helix 18
AB9
A
457 469Right-handed alpha
Helix 19
AC1
A
472 479Right-handed alpha
Helix 20
AC2
A
481 492Right-handed alpha
Helix 21
AC3
A
498 509Right-handed alpha
Helix 22
AC4
A
515 530Right-handed alpha
Helix 23
AC5
A
542 554Right-handed alpha
Helix 24
AC6
A
556 567Right-handed alpha
Helix 25
AC7
A
570 577Right-handed alpha
Helix 26
AC8
A
577 604Right-handed alpha
Helix 27
AC9
A
609 614Right-handed alpha
Helix 28
AD1
A
621 630Right-handed alpha
Helix 29
AD2
A
635 655Right-handed alpha
Helix 30
AD3
A
662 679Right-handed alpha
Helix 31
AD4
A
683 695Right-handed alpha
Helix 32
AD5
A
696 698Right-handed 310
Helix 33
AD6
A
700 712Right-handed alpha
Helix 34
AD7
A
721 728Right-handed alpha
Helix 35
AD8
A
759 770Right-handed alpha
Helix 36
AD9
A
771 773Right-handed 310
Helix 37
AE1
A
774 793Right-handed alpha
Helix 38
AE2
A
798 802Right-handed 310
Helix 39
AE3
A
813 821Right-handed alpha
Helix 40
AE4
A
850 863Right-handed alpha
Helix 41
AE5
A
869 876Right-handed alpha
Helix 42
AE6
B
24 32Right-handed alpha
Helix 43
AE7
B
49 58Right-handed alpha
Helix 44
AE8
B
75 79Right-handed 310
Helix 45
AE9
B
88 99Right-handed alpha
Helix 46
AF1
B
100 103Right-handed 310
Helix 47
AF2
B
113 123Right-handed alpha
Helix 48
AF3
B
140 151Right-handed alpha
Helix 49
AF4
B
152 161Right-handed alpha
Helix 50
AF5
B
199 224Right-handed alpha
Helix 51
AF6
B
225 229Right-handed 310
Helix 52
AF7
B
232 250Right-handed alpha
Helix 53
AF8
B
254 268Right-handed alpha
Helix 54
AF9
B
269 274Right-handed alpha
Helix 55
AG1
B
274 282Right-handed alpha
Helix 56
AG2
B
287 301Right-handed alpha
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There are 8 sheets in PDB entry 9R8G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 63first strand
Strand 2
A
19 30anti-parallel
Strand 3
A
118 120anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 63first strand
Strand 2
A
19 30anti-parallel
Strand 3
A
233 238parallel
Strand 4
A
179 180anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
79 86anti-parallel
Strand 3
A
67 74anti-parallel
Strand 4
A
129 135anti-parallel
Strand 5
A
159 161anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 607first strand
Strand 2
A
950 951anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
866 867first strand
Strand 2
A
911 918anti-parallel
Strand 3
A
955 962anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
940 942first strand
Strand 2
A
926 934anti-parallel
Strand 3
A
969 977anti-parallel
Strand 4
A
988 995anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 65first strand
Strand 2
B
81 84anti-parallel
Strand 3
B
20 23anti-parallel
Strand 4
B
105 110anti-parallel
Strand 5
B
163 170anti-parallel
Strand 6
B
177 182anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 128first strand
Strand 2
B
134 136anti-parallel
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