Analysis of interatomic Contacts of Structural Units in PDB entry:
9R8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R8L entry

There are 2 chains in PDB entry 9R8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 59TYR 578
B
 SER 59TYR 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 9R8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 94Right-handed alpha
Helix 2
AA2
A
100 118Right-handed alpha
Helix 3
AA3
A
141 145Right-handed 310
Helix 4
AA4
A
148 154Right-handed alpha
Helix 5
AA5
A
155 166Right-handed alpha
Helix 6
AA6
A
172 174Right-handed 310
Helix 7
AA7
A
175 209Right-handed alpha
Helix 8
AA8
A
216 229Right-handed alpha
Helix 9
AA9
A
232 242Right-handed alpha
Helix 10
AB1
A
245 272Right-handed alpha
Helix 11
AB2
A
284 320Right-handed alpha
Helix 12
AB3
A
321 324Right-handed 310
Helix 13
AB4
A
325 348Right-handed alpha
Helix 14
AB5
A
350 365Right-handed alpha
Helix 15
AB6
A
365 370Right-handed alpha
Helix 16
AB7
A
371 404Right-handed alpha
Helix 17
AB8
A
410 440Right-handed alpha
Helix 18
AB9
A
445 455Right-handed alpha
Helix 19
AC1
A
459 468Right-handed alpha
Helix 20
AC2
A
472 496Right-handed alpha
Helix 21
AC3
A
496 505Right-handed alpha
Helix 22
AC4
A
528 531Right-handed 310
Helix 23
AC5
A
532 543Right-handed alpha
Helix 24
AC6
A
545 551Right-handed alpha
Helix 25
AC7
A
556 561Right-handed alpha
Helix 26
AC8
A
562 564Right-handed 310
Helix 27
AC9
A
565 573Right-handed alpha
Helix 28
AD1
A
574 578Right-handed 310
Helix 29
AD2
B
60 94Right-handed alpha
Helix 30
AD3
B
100 118Right-handed alpha
Helix 31
AD4
B
141 145Right-handed 310
Helix 32
AD5
B
148 154Right-handed alpha
Helix 33
AD6
B
155 166Right-handed alpha
Helix 34
AD7
B
172 174Right-handed 310
Helix 35
AD8
B
175 209Right-handed alpha
Helix 36
AD9
B
216 229Right-handed alpha
Helix 37
AE1
B
232 242Right-handed alpha
Helix 38
AE2
B
245 271Right-handed alpha
Helix 39
AE3
B
284 320Right-handed alpha
Helix 40
AE4
B
321 324Right-handed 310
Helix 41
AE5
B
325 348Right-handed alpha
Helix 42
AE6
B
350 365Right-handed alpha
Helix 43
AE7
B
365 370Right-handed alpha
Helix 44
AE8
B
371 404Right-handed alpha
Helix 45
AE9
B
410 437Right-handed alpha
Helix 46
AF1
B
445 455Right-handed alpha
Helix 47
AF2
B
459 468Right-handed alpha
Helix 48
AF3
B
472 496Right-handed alpha
Helix 49
AF4
B
496 505Right-handed alpha
Helix 50
AF5
B
528 530Right-handed 310
Helix 51
AF6
B
531 545Right-handed alpha
Helix 52
AF7
B
545 551Right-handed alpha
Helix 53
AF8
B
556 560Right-handed 310
Helix 54
AF9
B
562 564Right-handed 310
Helix 55
AG1
B
565 573Right-handed alpha
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There are no sheets in PDB entry 9R8L
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il