Analysis of interatomic Contacts of Structural Units in PDB entry:
9R8T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R8T entry

There is 1 chain in PDB entry 9R8T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10CYS 849
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9R8T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 31Right-handed alpha
Helix 2
AA2
A
38 42Right-handed 310
Helix 3
AA3
A
122 130Right-handed alpha
Helix 4
AA4
A
178 187Right-handed alpha
Helix 5
AA5
A
202 209Right-handed alpha
Helix 6
AA6
A
215 231Right-handed alpha
Helix 7
AA7
A
257 264Right-handed alpha
Helix 8
AA8
A
299 305Right-handed 310
Helix 9
AA9
A
358 360Right-handed 310
Helix 10
AB1
A
381 385Right-handed 310
Helix 11
AB2
A
388 393Right-handed 310
Helix 12
AB3
A
400 426Right-handed alpha
Helix 13
AB4
A
435 441Right-handed alpha
Helix 14
AB5
A
442 449Right-handed 310
Helix 15
AB6
A
451 463Right-handed alpha
Helix 16
AB7
A
477 487Right-handed alpha
Helix 17
AB8
A
488 491Right-handed 310
Helix 18
AB9
A
497 507Right-handed alpha
Helix 19
AC1
A
541 556Right-handed alpha
Helix 20
AC2
A
572 577Right-handed alpha
Helix 21
AC3
A
594 610Right-handed alpha
Helix 22
AC4
A
620 629Right-handed alpha
Helix 23
AC5
A
637 641Right-handed 310
Helix 24
AC6
A
643 654Right-handed alpha
Helix 25
AC7
A
656 664Right-handed alpha
Helix 26
AC8
A
695 708Right-handed alpha
Helix 27
AC9
A
712 726Right-handed alpha
Helix 28
AD1
A
727 733Right-handed alpha
Helix 29
AD2
A
735 744Right-handed alpha
Helix 30
AD3
A
750 758Right-handed alpha
Helix 31
AD4
A
767 780Right-handed alpha
Helix 32
AD5
A
781 793Right-handed alpha
Helix 33
AD6
A
834 849Right-handed alpha
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There are 9 sheets in PDB entry 9R8T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 106first strand
Strand 2
A
47 51anti-parallel
Strand 3
A
152 154anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 98first strand
Strand 2
A
61 67anti-parallel
Strand 3
A
138 141anti-parallel
Strand 4
A
116 120anti-parallel
Strand 5
A
110 113anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 248first strand
Strand 2
A
279 285anti-parallel
Strand 3
A
348 356anti-parallel
Strand 4
A
307 316anti-parallel
Strand 5
A
319 326anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
364 365anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 340first strand
Strand 2
A
291 298anti-parallel
Strand 3
A
367 372anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 476first strand
Strand 2
A
529 532parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
569 571first strand
Strand 2
A
586 588anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
671 673first strand
Strand 2
A
679 681anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
803 806first strand
Strand 2
A
826 829parallel
Strand 3
A
819 821anti-parallel
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