Analysis of interatomic Contacts of Structural Units in PDB entry:
9R9B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9R9B entry

There are 4 chains in PDB entry 9R9B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4ASN 572
B
 LYS 550LYS 556
B
 GLU 558LEU 560
B
 GLU 562ASP 569
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9R9B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 19Right-handed 310
Helix 2
AA2
A
21 25Right-handed 310
Helix 3
AA3
A
145 149Right-handed 310
Helix 4
AA4
A
333 341Right-handed alpha
Helix 5
AA5
A
344 356Right-handed alpha
Helix 6
AA6
A
360 373Right-handed alpha
Helix 7
AA7
A
376 387Right-handed alpha
Helix 8
AA8
A
394 403Right-handed alpha
Helix 9
AA9
A
412 423Right-handed alpha
Helix 10
AB1
A
428 442Right-handed alpha
Helix 11
AB2
A
445 454Right-handed alpha
Helix 12
AB3
A
460 469Right-handed alpha
Helix 13
AB4
A
471 483Right-handed alpha
Helix 14
AB5
A
484 495Right-handed alpha
Helix 15
AB6
A
497 499Right-handed 310
Helix 16
AB7
A
500 508Right-handed alpha
Helix 17
AB8
A
513 525Right-handed alpha
Helix 18
AB9
A
525 536Right-handed alpha
Helix 19
AC1
A
545 557Right-handed alpha
Helix 20
AC2
A
558 572Right-handed alpha
Helix 21
AC3
B
552 564Right-handed alpha
Helix 22
AC4
B
564 569Right-handed alpha
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There are 7 sheets in PDB entry 9R9B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 14first strand
Strand 2
A
323 329anti-parallel
Strand 3
A
314 318anti-parallel
Strand 4
A
305 309anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
37 44anti-parallel
Strand 3
A
47 54anti-parallel
Strand 4
A
62 64anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
79 84anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
97 103anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
118 122anti-parallel
Strand 3
A
126 131anti-parallel
Strand 4
A
139 143anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 158first strand
Strand 2
A
164 172anti-parallel
Strand 3
A
177 185anti-parallel
Strand 4
A
193 194anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 204first strand
Strand 2
A
213 222anti-parallel
Strand 3
A
225 232anti-parallel
Strand 4
A
246 249anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 267first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
281 286anti-parallel
Strand 4
A
292 297anti-parallel
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