Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 9RA5 entry
There are 6 chains in PDB entry 9RA5
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
HIS 159 | LEU 203 |
D
|
GLU 497 | GLU 497 |
D
|
ILE 499 | ASN 500 |
D
|
SER 502 | ILE 506 |
D
|
LYS 508 | ASP 510 |
D
|
LEU 512 | VAL 516 |
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There are 2
helices in PDB entry 9RA5. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 159 |
203 | Right-handed alpha |
| Helix 2 |
AA2 | D
| 497 |
513 | Right-handed alpha |
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There are no sheets in PDB entry
9RA5
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il