Analysis of interatomic Contacts of Structural Units in PDB entry:
9RBD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RBD entry

There are 20 chains in PDB entry 9RBD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
J
 SER 103TYR 126
L
 SER 103TYR 126
g
 SER 103TYR 126
i
 SER 103TYR 126
A
 SER 103TYR 126
B
 SER 103TYR 126
C
 SER 103TYR 126
D
 SER 103TYR 126
E
 SER 103TYR 126
F
 SER 103TYR 126
G
 SER 103TYR 126
H
 SER 103TYR 126
I
 SER 103TYR 126
K
 SER 103TYR 126
M
 SER 103TYR 126
N
 SER 103TYR 126
O
 SER 103TYR 126
P
 SER 103TYR 126
Q
 SER 103TYR 126
R
 SER 103TYR 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9RBD

There are 9 sheets in PDB entry 9RBD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
105 106first strand
Strand 2
A
105 106parallel
Strand 3
E
105 106parallel
Strand 4
I
105 106parallel
Strand 5
O
105 106parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
109 110first strand
Strand 2
A
109 110parallel
Strand 3
E
109 110parallel
Strand 4
I
109 110parallel
Strand 5
O
109 110parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
114 119first strand
Strand 2
A
114 119parallel
Strand 3
E
114 119parallel
Strand 4
I
114 119parallel
Strand 5
O
114 119parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
105 106first strand
Strand 2
B
105 106parallel
Strand 3
F
105 106parallel
Strand 4
K
105 106parallel
Strand 5
P
105 106parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
109 119first strand
Strand 2
B
109 119parallel
Strand 3
F
109 119parallel
Strand 4
K
109 119parallel
Strand 5
P
109 119parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
g
104 105first strand
Strand 2
C
104 105parallel
Strand 3
G
104 105parallel
Strand 4
M
104 105parallel
Strand 5
Q
104 105parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
g
110 119first strand
Strand 2
C
110 119parallel
Strand 3
G
110 119parallel
Strand 4
M
110 119parallel
Strand 5
Q
110 119parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
i
109 110first strand
Strand 2
D
109 110parallel
Strand 3
H
109 110parallel
Strand 4
N
109 110parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
i
114 119first strand
Strand 2
D
114 119parallel
Strand 3
H
114 119parallel
Strand 4
N
114 119parallel
Strand 5
R
114 119parallel
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