Analysis of interatomic Contacts of Structural Units in PDB entry:
9RCP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RCP entry

There are 4 chains in PDB entry 9RCP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 1	PHE 793
B	LEU 2	PHE 793
C	MET 0	PHE 793
D	GLY 1	PHE 793

There are154 helices in PDB entry 9RCP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	23	Right-handed alpha
Helix 2	AA2	A	29	41	Right-handed alpha
Helix 3	AA3	A	46	62	Right-handed alpha
Helix 4	AA4	A	91	97	Right-handed alpha
Helix 5	AA5	A	100	104	Right-handed 310
Helix 6	AA6	A	112	124	Right-handed alpha
Helix 7	AA7	A	130	139	Right-handed alpha
Helix 8	AA8	A	140	149	Right-handed alpha
Helix 9	AA9	A	154	160	Right-handed alpha
Helix 10	AB1	A	168	190	Right-handed alpha
Helix 11	AB2	A	197	233	Right-handed alpha
Helix 12	AB3	A	235	252	Right-handed alpha
Helix 13	AB4	A	259	278	Right-handed alpha
Helix 14	AB5	A	287	298	Right-handed alpha
Helix 15	AB6	A	303	319	Right-handed alpha
Helix 16	AB7	A	326	333	Right-handed alpha
Helix 17	AB8	A	356	370	Right-handed alpha
Helix 18	AB9	A	385	397	Right-handed alpha
Helix 19	AC1	A	408	418	Right-handed alpha
Helix 20	AC2	A	421	427	Right-handed alpha
Helix 21	AC3	A	453	462	Right-handed alpha
Helix 22	AC4	A	477	481	Right-handed 310
Helix 23	AC5	A	483	517	Right-handed alpha
Helix 24	AC6	A	519	524	Right-handed alpha
Helix 25	AC7	A	528	533	Right-handed alpha
Helix 26	AC8	A	535	539	Right-handed 310
Helix 27	AC9	A	552	567	Right-handed alpha
Helix 28	AD1	A	574	584	Right-handed alpha
Helix 29	AD2	A	585	588	Right-handed 310
Helix 30	AD3	A	592	604	Right-handed alpha
Helix 31	AD4	A	612	631	Right-handed alpha
Helix 32	AD5	A	650	656	Right-handed alpha
Helix 33	AD6	A	685	694	Right-handed alpha
Helix 34	AD7	A	712	716	Right-handed 310
Helix 35	AD8	A	717	735	Right-handed alpha
Helix 36	AD9	A	746	756	Right-handed alpha
Helix 37	AE1	A	757	760	Right-handed 310
Helix 38	AE2	A	775	777	Right-handed 310
Helix 39	AE3	A	778	788	Right-handed alpha
Helix 40	AE4	B	10	23	Right-handed alpha
Helix 41	AE5	B	29	42	Right-handed alpha
Helix 42	AE6	B	46	62	Right-handed alpha
Helix 43	AE7	B	91	97	Right-handed alpha
Helix 44	AE8	B	100	104	Right-handed 310
Helix 45	AE9	B	112	124	Right-handed alpha
Helix 46	AF1	B	130	139	Right-handed alpha
Helix 47	AF2	B	140	149	Right-handed alpha
Helix 48	AF3	B	154	160	Right-handed alpha
Helix 49	AF4	B	168	190	Right-handed alpha
Helix 50	AF5	B	197	233	Right-handed alpha
Helix 51	AF6	B	235	252	Right-handed alpha
Helix 52	AF7	B	259	278	Right-handed alpha
Helix 53	AF8	B	287	298	Right-handed alpha
Helix 54	AF9	B	303	319	Right-handed alpha
Helix 55	AG1	B	326	333	Right-handed alpha
Helix 56	AG2	B	356	370	Right-handed alpha
Helix 57	AG3	B	385	397	Right-handed alpha
Helix 58	AG4	B	408	418	Right-handed alpha
Helix 59	AG5	B	421	427	Right-handed alpha
Helix 60	AG6	B	453	462	Right-handed alpha
Helix 61	AG7	B	477	481	Right-handed 310
Helix 62	AG8	B	483	517	Right-handed alpha
Helix 63	AG9	B	519	524	Right-handed alpha
Helix 64	AH1	B	528	533	Right-handed alpha
Helix 65	AH2	B	535	539	Right-handed 310
Helix 66	AH3	B	552	567	Right-handed alpha
Helix 67	AH4	B	574	584	Right-handed alpha
Helix 68	AH5	B	585	588	Right-handed 310
Helix 69	AH6	B	592	604	Right-handed alpha
Helix 70	AH7	B	612	631	Right-handed alpha
Helix 71	AH8	B	650	656	Right-handed alpha
Helix 72	AH9	B	685	694	Right-handed alpha
Helix 73	AI1	B	712	716	Right-handed 310
Helix 74	AI2	B	717	735	Right-handed alpha
Helix 75	AI3	B	746	756	Right-handed alpha
Helix 76	AI4	B	757	760	Right-handed 310
Helix 77	AI5	B	775	777	Right-handed 310
Helix 78	AI6	B	778	788	Right-handed alpha
Helix 79	AI7	C	10	23	Right-handed alpha
Helix 80	AI8	C	29	42	Right-handed alpha
Helix 81	AI9	C	46	62	Right-handed alpha
Helix 82	AJ1	C	91	97	Right-handed alpha
Helix 83	AJ2	C	112	124	Right-handed alpha
Helix 84	AJ3	C	130	139	Right-handed alpha
Helix 85	AJ4	C	140	149	Right-handed alpha
Helix 86	AJ5	C	154	160	Right-handed alpha
Helix 87	AJ6	C	168	190	Right-handed alpha
Helix 88	AJ7	C	197	231	Right-handed alpha
Helix 89	AJ8	C	235	252	Right-handed alpha
Helix 90	AJ9	C	259	278	Right-handed alpha
Helix 91	AK1	C	287	298	Right-handed alpha
Helix 92	AK2	C	303	319	Right-handed alpha
Helix 93	AK3	C	328	333	Right-handed alpha
Helix 94	AK4	C	356	370	Right-handed alpha
Helix 95	AK5	C	385	397	Right-handed alpha
Helix 96	AK6	C	408	418	Right-handed alpha
Helix 97	AK7	C	421	427	Right-handed alpha
Helix 98	AK8	C	453	462	Right-handed alpha
Helix 99	AK9	C	477	481	Right-handed 310
Helix 100	AL1	C	483	517	Right-handed alpha
Helix 101	AL2	C	519	524	Right-handed alpha
Helix 102	AL3	C	528	533	Right-handed alpha
Helix 103	AL4	C	535	539	Right-handed 310
Helix 104	AL5	C	552	567	Right-handed alpha
Helix 105	AL6	C	574	584	Right-handed alpha
Helix 106	AL7	C	585	588	Right-handed 310
Helix 107	AL8	C	592	604	Right-handed alpha
Helix 108	AL9	C	612	631	Right-handed alpha
Helix 109	AM1	C	650	656	Right-handed alpha
Helix 110	AM2	C	685	694	Right-handed alpha
Helix 111	AM3	C	712	717	Right-handed alpha
Helix 112	AM4	C	717	735	Right-handed alpha
Helix 113	AM5	C	746	756	Right-handed alpha
Helix 114	AM6	C	757	760	Right-handed 310
Helix 115	AM7	C	775	777	Right-handed 310
Helix 116	AM8	C	778	788	Right-handed alpha
Helix 117	AM9	D	10	23	Right-handed alpha
Helix 118	AN1	D	29	42	Right-handed alpha
Helix 119	AN2	D	46	62	Right-handed alpha
Helix 120	AN3	D	91	97	Right-handed alpha
Helix 121	AN4	D	112	124	Right-handed alpha
Helix 122	AN5	D	130	139	Right-handed alpha
Helix 123	AN6	D	140	149	Right-handed alpha
Helix 124	AN7	D	154	160	Right-handed alpha
Helix 125	AN8	D	168	191	Right-handed alpha
Helix 126	AN9	D	197	232	Right-handed alpha
Helix 127	AO1	D	235	252	Right-handed alpha
Helix 128	AO2	D	259	278	Right-handed alpha
Helix 129	AO3	D	287	299	Right-handed alpha
Helix 130	AO4	D	303	319	Right-handed alpha
Helix 131	AO5	D	328	333	Right-handed alpha
Helix 132	AO6	D	356	370	Right-handed alpha
Helix 133	AO7	D	385	397	Right-handed alpha
Helix 134	AO8	D	408	418	Right-handed alpha
Helix 135	AO9	D	421	427	Right-handed alpha
Helix 136	AP1	D	453	462	Right-handed alpha
Helix 137	AP2	D	477	481	Right-handed 310
Helix 138	AP3	D	483	517	Right-handed alpha
Helix 139	AP4	D	519	524	Right-handed alpha
Helix 140	AP5	D	528	533	Right-handed alpha
Helix 141	AP6	D	535	539	Right-handed 310
Helix 142	AP7	D	552	567	Right-handed alpha
Helix 143	AP8	D	574	584	Right-handed alpha
Helix 144	AP9	D	585	588	Right-handed 310
Helix 145	AQ1	D	592	604	Right-handed alpha
Helix 146	AQ2	D	612	631	Right-handed alpha
Helix 147	AQ3	D	650	656	Right-handed alpha
Helix 148	AQ4	D	685	695	Right-handed alpha
Helix 149	AQ5	D	713	716	Right-handed 310
Helix 150	AQ6	D	717	735	Right-handed alpha
Helix 151	AQ7	D	746	756	Right-handed alpha
Helix 152	AQ8	D	757	760	Right-handed 310
Helix 153	AQ9	D	775	777	Right-handed 310
Helix 154	AR1	D	778	788	Right-handed alpha

There are 21 sheets in PDB entry 9RCP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	153	first strand
Strand 2	A	449	452	anti-parallel
Strand 3	A	548	551	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	345	first strand
Strand 2	A	375	380	parallel
Strand 3	A	404	407	parallel
Strand 4	A	739	744	anti-parallel
Strand 5	A	708	711	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	431	first strand
Strand 2	A	435	437	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	443	first strand
Strand 2	A	543	546	parallel
Strand 3	A	640	641	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	764	766	first strand
Strand 2	A	771	773	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	449	452	anti-parallel
Strand 3	B	548	551	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	344	first strand
Strand 2	B	375	380	parallel
Strand 3	B	404	407	parallel
Strand 4	B	739	744	anti-parallel
Strand 5	B	708	711	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	431	first strand
Strand 2	B	435	437	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	443	first strand
Strand 2	B	543	546	parallel
Strand 3	B	640	641	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	764	766	first strand
Strand 2	B	771	773	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	153	first strand
Strand 2	C	449	452	anti-parallel
Strand 3	C	548	551	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	344	first strand
Strand 2	C	375	380	parallel
Strand 3	C	404	407	parallel
Strand 4	C	739	744	anti-parallel
Strand 5	C	708	711	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	429	431	first strand
Strand 2	C	435	437	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	442	443	first strand
Strand 2	C	543	546	parallel
Strand 3	C	640	641	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	764	766	first strand
Strand 2	C	771	773	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	153	first strand
Strand 2	D	449	452	anti-parallel
Strand 3	D	548	551	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	344	first strand
Strand 2	D	375	380	parallel
Strand 3	D	404	407	parallel
Strand 4	D	739	744	anti-parallel
Strand 5	D	708	711	parallel
Strand 6	D	790	791	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	429	431	first strand
Strand 2	D	435	437	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	442	443	first strand
Strand 2	D	543	546	parallel
Strand 3	D	640	641	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	644	645	first strand
Strand 2	D	704	705	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	764	766	first strand
Strand 2	D	771	773	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RCP

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RCP