Analysis of interatomic Contacts of Structural Units in PDB entry:
9RDC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RDC entry

There are 3 chains in PDB entry 9RDC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 78SER 675
B
 VAL 78SER 675
C
 MET 1LYS 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 9RDC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 89Right-handed alpha
Helix 2
AA2
A
92 100Right-handed alpha
Helix 3
AA3
A
106 111Right-handed alpha
Helix 4
AA4
A
113 128Right-handed alpha
Helix 5
AA5
A
135 146Right-handed alpha
Helix 6
AA6
A
146 158Right-handed alpha
Helix 7
AA7
A
159 162Right-handed 310
Helix 8
AA8
A
163 181Right-handed alpha
Helix 9
AA9
A
184 192Right-handed alpha
Helix 10
AB1
A
197 201Right-handed 310
Helix 11
AB2
A
204 221Right-handed alpha
Helix 12
AB3
A
229 238Right-handed alpha
Helix 13
AB4
A
240 258Right-handed alpha
Helix 14
AB5
A
258 279Right-handed alpha
Helix 15
AB6
A
282 292Right-handed alpha
Helix 16
AB7
A
295 302Right-handed alpha
Helix 17
AB8
A
303 319Right-handed alpha
Helix 18
AB9
A
320 323Right-handed 310
Helix 19
AC1
A
325 335Right-handed alpha
Helix 20
AC2
A
335 349Right-handed alpha
Helix 21
AC3
A
349 370Right-handed alpha
Helix 22
AC4
A
373 383Right-handed alpha
Helix 23
AC5
A
394 410Right-handed alpha
Helix 24
AC6
A
413 425Right-handed alpha
Helix 25
AC7
A
426 438Right-handed alpha
Helix 26
AC8
A
440 461Right-handed alpha
Helix 27
AC9
A
464 472Right-handed alpha
Helix 28
AD1
A
473 477Right-handed 310
Helix 29
AD2
A
478 483Right-handed 310
Helix 30
AD3
A
484 501Right-handed alpha
Helix 31
AD4
A
507 531Right-handed alpha
Helix 32
AD5
A
531 552Right-handed alpha
Helix 33
AD6
A
555 563Right-handed alpha
Helix 34
AD7
A
564 574Right-handed 310
Helix 35
AD8
A
575 592Right-handed alpha
Helix 36
AD9
A
593 596Right-handed 310
Helix 37
AE1
A
598 607Right-handed alpha
Helix 38
AE2
A
608 620Right-handed alpha
Helix 39
AE3
A
622 644Right-handed alpha
Helix 40
AE4
A
646 654Right-handed alpha
Helix 41
AE5
A
659 675Right-handed alpha
Helix 42
AE6
B
79 90Right-handed alpha
Helix 43
AE7
B
92 100Right-handed alpha
Helix 44
AE8
B
106 111Right-handed alpha
Helix 45
AE9
B
113 129Right-handed alpha
Helix 46
AF1
B
135 146Right-handed alpha
Helix 47
AF2
B
146 158Right-handed alpha
Helix 48
AF3
B
160 181Right-handed alpha
Helix 49
AF4
B
184 192Right-handed alpha
Helix 50
AF5
B
193 201Right-handed 310
Helix 51
AF6
B
204 221Right-handed alpha
Helix 52
AF7
B
229 238Right-handed alpha
Helix 53
AF8
B
240 258Right-handed alpha
Helix 54
AF9
B
261 279Right-handed alpha
Helix 55
AG1
B
282 292Right-handed alpha
Helix 56
AG2
B
295 302Right-handed alpha
Helix 57
AG3
B
303 319Right-handed alpha
Helix 58
AG4
B
320 323Right-handed 310
Helix 59
AG5
B
325 335Right-handed alpha
Helix 60
AG6
B
335 348Right-handed alpha
Helix 61
AG7
B
352 370Right-handed alpha
Helix 62
AG8
B
373 386Right-handed alpha
Helix 63
AG9
B
386 391Right-handed alpha
Helix 64
AH1
B
394 410Right-handed alpha
Helix 65
AH2
B
413 425Right-handed alpha
Helix 66
AH3
B
426 438Right-handed alpha
Helix 67
AH4
B
440 461Right-handed alpha
Helix 68
AH5
B
464 472Right-handed alpha
Helix 69
AH6
B
473 477Right-handed 310
Helix 70
AH7
B
480 483Right-handed 310
Helix 71
AH8
B
484 501Right-handed alpha
Helix 72
AH9
B
507 531Right-handed alpha
Helix 73
AI1
B
531 543Right-handed alpha
Helix 74
AI2
B
547 552Right-handed alpha
Helix 75
AI3
B
555 563Right-handed alpha
Helix 76
AI4
B
564 572Right-handed 310
Helix 77
AI5
B
575 592Right-handed alpha
Helix 78
AI6
B
593 596Right-handed 310
Helix 79
AI7
B
598 607Right-handed alpha
Helix 80
AI8
B
608 622Right-handed alpha
Helix 81
AI9
B
622 643Right-handed alpha
Helix 82
AJ1
B
646 654Right-handed alpha
Helix 83
AJ2
B
659 674Right-handed alpha
Helix 84
AJ3
C
2 10Right-handed alpha
Helix 85
AJ4
C
18 32Right-handed alpha
Helix 86
AJ5
C
32 48Right-handed alpha
Helix 87
AJ6
C
51 69Right-handed alpha
Helix 88
AJ7
C
70 80Right-handed alpha
Helix 89
AJ8
C
81 91Right-handed alpha
Helix 90
AJ9
C
96 114Right-handed alpha
Helix 91
AK1
C
115 119Right-handed 310
Helix 92
AK2
C
122 135Right-handed alpha
Helix 93
AK3
D
4 10Right-handed alpha
Helix 94
AK4
D
18 32Right-handed alpha
Helix 95
AK5
D
32 48Right-handed alpha
Helix 96
AK6
D
51 69Right-handed alpha
Helix 97
AK7
D
70 80Right-handed alpha
Helix 98
AK8
D
81 92Right-handed alpha
Helix 99
AK9
D
96 114Right-handed alpha
Helix 100
AL1
D
115 119Right-handed 310
Helix 101
AL2
D
122 135Right-handed alpha
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There are no sheets in PDB entry 9RDC
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