Analysis of interatomic Contacts of Structural Units in PDB entry:
9RFD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RFD entry

There are 2 chains in PDB entry 9RFD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 13SER 363
B
 MET 13SER 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9RFD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 38Right-handed alpha
Helix 2
AA2
A
39 41Right-handed 310
Helix 3
AA3
A
47 56Right-handed alpha
Helix 4
AA4
A
57 59Right-handed 310
Helix 5
AA5
A
76 93Right-handed alpha
Helix 6
AA6
A
96 111Right-handed alpha
Helix 7
AA7
A
112 115Right-handed 310
Helix 8
AA8
A
119 129Right-handed alpha
Helix 9
AA9
A
136 146Right-handed alpha
Helix 10
AB1
A
151 156Right-handed alpha
Helix 11
AB2
A
157 164Right-handed alpha
Helix 12
AB3
A
166 180Right-handed alpha
Helix 13
AB4
A
184 202Right-handed alpha
Helix 14
AB5
A
207 223Right-handed alpha
Helix 15
AB6
A
225 235Right-handed alpha
Helix 16
AB7
A
240 254Right-handed alpha
Helix 17
AB8
A
259 268Right-handed alpha
Helix 18
AB9
A
272 275Right-handed 310
Helix 19
AC1
A
276 287Right-handed alpha
Helix 20
AC2
A
299 311Right-handed alpha
Helix 21
AC3
A
314 331Right-handed alpha
Helix 22
AC4
A
332 335Right-handed 310
Helix 23
AC5
A
336 342Right-handed alpha
Helix 24
AC6
A
345 361Right-handed alpha
Helix 25
AC7
B
19 43Right-handed alpha
Helix 26
AC8
B
47 55Right-handed alpha
Helix 27
AC9
B
56 59Right-handed 310
Helix 28
AD1
B
76 93Right-handed alpha
Helix 29
AD2
B
96 111Right-handed alpha
Helix 30
AD3
B
119 128Right-handed alpha
Helix 31
AD4
B
136 146Right-handed alpha
Helix 32
AD5
B
151 156Right-handed alpha
Helix 33
AD6
B
157 164Right-handed alpha
Helix 34
AD7
B
166 180Right-handed alpha
Helix 35
AD8
B
184 202Right-handed alpha
Helix 36
AD9
B
207 224Right-handed alpha
Helix 37
AE1
B
225 235Right-handed alpha
Helix 38
AE2
B
240 254Right-handed alpha
Helix 39
AE3
B
259 268Right-handed alpha
Helix 40
AE4
B
272 275Right-handed 310
Helix 41
AE5
B
276 287Right-handed alpha
Helix 42
AE6
B
299 310Right-handed alpha
Helix 43
AE7
B
314 331Right-handed alpha
Helix 44
AE8
B
332 335Right-handed 310
Helix 45
AE9
B
336 341Right-handed alpha
Helix 46
AF1
B
345 361Right-handed alpha
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There are no sheets in PDB entry 9RFD
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