Analysis of interatomic Contacts of Structural Units in PDB entry:
9RHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RHH entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 9RHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 160GLU 408
A
 ALA 410ASN 585
B
 THR 160ASN 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9RHH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
161 166Right-handed alpha
Helix 2
AA2
A
204 220Right-handed alpha
Helix 3
AA3
A
390 403Right-handed alpha
Helix 4
AA4
A
415 436Right-handed alpha
Helix 5
AA5
A
466 470Right-handed 310
Helix 6
AA6
A
498 503Right-handed alpha
Helix 7
AA7
A
508 525Right-handed alpha
Helix 8
AA8
A
529 540Right-handed alpha
Helix 9
AA9
A
541 543Right-handed 310
Helix 10
AB1
A
546 553Right-handed alpha
Helix 11
AB2
A
553 564Right-handed alpha
Helix 12
AB3
A
567 571Right-handed 310
Helix 13
AB4
A
573 579Right-handed alpha
Helix 14
AB5
B
161 166Right-handed alpha
Helix 15
AB6
B
204 220Right-handed alpha
Helix 16
AB7
B
390 403Right-handed alpha
Helix 17
AB8
B
416 436Right-handed alpha
Helix 18
AB9
B
466 470Right-handed 310
Helix 19
AC1
B
498 503Right-handed alpha
Helix 20
AC2
B
508 525Right-handed alpha
Helix 21
AC3
B
529 540Right-handed alpha
Helix 22
AC4
B
541 543Right-handed 310
Helix 23
AC5
B
546 553Right-handed alpha
Helix 24
AC6
B
553 564Right-handed alpha
Helix 25
AC7
B
567 571Right-handed 310
Helix 26
AC8
B
573 579Right-handed alpha
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There are 4 sheets in PDB entry 9RHH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 174first strand
Strand 2
A
180 186anti-parallel
Strand 3
A
192 200anti-parallel
Strand 4
A
378 385anti-parallel
Strand 5
A
229 236anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
448 451first strand
Strand 2
A
456 459anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 174first strand
Strand 2
B
180 186anti-parallel
Strand 3
B
192 200anti-parallel
Strand 4
B
378 385anti-parallel
Strand 5
B
229 236anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 451first strand
Strand 2
B
456 459anti-parallel
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