Analysis of interatomic Contacts of Structural Units in PDB entry:
9RI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RI7 entry

There is 1 chain in PDB entry 9RI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 142GLY 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 9RI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
158 173Right-handed alpha
Helix 2
AA2
A
202 212Right-handed alpha
Helix 3
AA3
A
222 234Right-handed alpha
Helix 4
AA4
A
236 240Right-handed 310
Helix 5
AA5
A
259 261Right-handed 310
Helix 6
AA6
A
262 273Right-handed alpha
Helix 7
AA7
A
289 304Right-handed alpha
Helix 8
AA8
A
307 311Right-handed alpha
Helix 9
AA9
A
315 326Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9RI7.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 195first strand
Strand 2
A
180 187anti-parallel
Strand 3
A
144 151parallel
Strand 4
A
246 253parallel
Strand 5
A
275 281parallel
Strand 6
A
312 314parallel
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