Analysis of interatomic Contacts of Structural Units in PDB entry:
9RJE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RJE entry

There is 1 chain in PDB entry 9RJE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 68GLY 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9RJE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 110Right-handed alpha
Helix 2
AA2
A
114 116Right-handed 310
Helix 3
AA3
A
126 131Right-handed alpha
Helix 4
AA4
A
135 144Right-handed alpha
Helix 5
AA5
A
148 156Right-handed alpha
Helix 6
AA6
A
158 164Right-handed alpha
Helix 7
AA7
A
164 189Right-handed alpha
Helix 8
AA8
A
213 225Right-handed alpha
Helix 9
AA9
A
241 248Right-handed alpha
Helix 10
AB1
A
283 303Right-handed alpha
Helix 11
AB2
A
327 345Right-handed alpha
Helix 12
AB3
A
360 382Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9RJE.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
A
78 79parallel
Strand 3
A
190 193parallel
Strand 4
A
349 352parallel
Strand 5
A
306 310parallel
Strand 6
A
231 235parallel
Strand 7
A
254 261parallel
Strand 8
A
274 278parallel
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