Analysis of interatomic Contacts of Structural Units in PDB entry:
9RL0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RL0 entry

There are 8 chains in PDB entry 9RL0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	MET 1	VAL 340
F	MET 1	VAL 340
G	MET 1	VAL 340
H	MET 1	LEU 339
A	MET 1	VAL 340
B	MET 1	VAL 340
C	MET 1	VAL 340
D	MET 1	VAL 340

There are107 helices in PDB entry 9RL0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	10	23	Right-handed alpha
Helix 2	AA2	E	37	47	Right-handed alpha
Helix 3	AA3	E	60	72	Right-handed alpha
Helix 4	AA4	E	84	91	Right-handed alpha
Helix 5	AA5	E	91	114	Right-handed alpha
Helix 6	AA6	E	126	129	Right-handed 310
Helix 7	AA7	E	161	183	Right-handed alpha
Helix 8	AA8	E	206	221	Right-handed alpha
Helix 9	AA9	E	242	255	Right-handed alpha
Helix 10	AB1	E	255	260	Right-handed alpha
Helix 11	AB2	E	269	271	Right-handed 310
Helix 12	AB3	E	276	287	Right-handed alpha
Helix 13	AB4	E	310	317	Right-handed alpha
Helix 14	AB5	E	324	340	Right-handed alpha
Helix 15	AB6	F	10	23	Right-handed alpha
Helix 16	AB7	F	37	47	Right-handed alpha
Helix 17	AB8	F	60	72	Right-handed alpha
Helix 18	AB9	F	84	91	Right-handed alpha
Helix 19	AC1	F	91	114	Right-handed alpha
Helix 20	AC2	F	124	129	Right-handed 310
Helix 21	AC3	F	161	182	Right-handed alpha
Helix 22	AC4	F	207	221	Right-handed alpha
Helix 23	AC5	F	241	255	Right-handed alpha
Helix 24	AC6	F	255	260	Right-handed alpha
Helix 25	AC7	F	276	287	Right-handed alpha
Helix 26	AC8	F	310	317	Right-handed alpha
Helix 27	AC9	F	324	340	Right-handed alpha
Helix 28	AD1	G	10	23	Right-handed alpha
Helix 29	AD2	G	37	47	Right-handed alpha
Helix 30	AD3	G	60	72	Right-handed alpha
Helix 31	AD4	G	84	91	Right-handed alpha
Helix 32	AD5	G	91	114	Right-handed alpha
Helix 33	AD6	G	124	129	Right-handed 310
Helix 34	AD7	G	161	183	Right-handed alpha
Helix 35	AD8	G	206	220	Right-handed alpha
Helix 36	AD9	G	241	255	Right-handed alpha
Helix 37	AE1	G	255	260	Right-handed alpha
Helix 38	AE2	G	276	288	Right-handed alpha
Helix 39	AE3	G	310	317	Right-handed alpha
Helix 40	AE4	G	324	340	Right-handed alpha
Helix 41	AE5	H	11	23	Right-handed alpha
Helix 42	AE6	H	37	49	Right-handed alpha
Helix 43	AE7	H	60	72	Right-handed alpha
Helix 44	AE8	H	84	91	Right-handed alpha
Helix 45	AE9	H	91	114	Right-handed alpha
Helix 46	AF1	H	124	129	Right-handed 310
Helix 47	AF2	H	162	183	Right-handed alpha
Helix 48	AF3	H	207	220	Right-handed alpha
Helix 49	AF4	H	241	255	Right-handed alpha
Helix 50	AF5	H	256	259	Right-handed 310
Helix 51	AF6	H	276	285	Right-handed alpha
Helix 52	AF7	H	310	317	Right-handed alpha
Helix 53	AF8	H	324	339	Right-handed alpha
Helix 54	AF9	A	10	23	Right-handed alpha
Helix 55	AG1	A	37	47	Right-handed alpha
Helix 56	AG2	A	60	72	Right-handed alpha
Helix 57	AG3	A	84	91	Right-handed alpha
Helix 58	AG4	A	91	114	Right-handed alpha
Helix 59	AG5	A	124	129	Right-handed 310
Helix 60	AG6	A	161	182	Right-handed alpha
Helix 61	AG7	A	206	220	Right-handed alpha
Helix 62	AG8	A	242	255	Right-handed alpha
Helix 63	AG9	A	255	260	Right-handed alpha
Helix 64	AH1	A	276	285	Right-handed alpha
Helix 65	AH2	A	310	317	Right-handed alpha
Helix 66	AH3	A	324	340	Right-handed alpha
Helix 67	AH4	B	10	23	Right-handed alpha
Helix 68	AH5	B	37	47	Right-handed alpha
Helix 69	AH6	B	60	72	Right-handed alpha
Helix 70	AH7	B	84	91	Right-handed alpha
Helix 71	AH8	B	91	114	Right-handed alpha
Helix 72	AH9	B	124	129	Right-handed 310
Helix 73	AI1	B	161	183	Right-handed alpha
Helix 74	AI2	B	206	220	Right-handed alpha
Helix 75	AI3	B	242	255	Right-handed alpha
Helix 76	AI4	B	256	259	Right-handed 310
Helix 77	AI5	B	269	273	Right-handed 310
Helix 78	AI6	B	276	287	Right-handed alpha
Helix 79	AI7	B	310	317	Right-handed alpha
Helix 80	AI8	B	324	338	Right-handed alpha
Helix 81	AI9	C	10	23	Right-handed alpha
Helix 82	AJ1	C	37	47	Right-handed alpha
Helix 83	AJ2	C	60	72	Right-handed alpha
Helix 84	AJ3	C	84	91	Right-handed alpha
Helix 85	AJ4	C	91	114	Right-handed alpha
Helix 86	AJ5	C	124	129	Right-handed 310
Helix 87	AJ6	C	161	181	Right-handed alpha
Helix 88	AJ7	C	206	220	Right-handed alpha
Helix 89	AJ8	C	241	255	Right-handed alpha
Helix 90	AJ9	C	255	260	Right-handed alpha
Helix 91	AK1	C	276	288	Right-handed alpha
Helix 92	AK2	C	310	316	Right-handed alpha
Helix 93	AK3	C	324	340	Right-handed alpha
Helix 94	AK4	D	10	23	Right-handed alpha
Helix 95	AK5	D	37	47	Right-handed alpha
Helix 96	AK6	D	60	72	Right-handed alpha
Helix 97	AK7	D	84	91	Right-handed alpha
Helix 98	AK8	D	91	114	Right-handed alpha
Helix 99	AK9	D	124	129	Right-handed 310
Helix 100	AL1	D	162	182	Right-handed alpha
Helix 101	AL2	D	208	220	Right-handed alpha
Helix 102	AL3	D	241	255	Right-handed alpha
Helix 103	AL4	D	255	260	Right-handed alpha
Helix 104	AL5	D	275	287	Right-handed alpha
Helix 105	AL6	D	298	302	Right-handed 310
Helix 106	AL7	D	311	318	Right-handed alpha
Helix 107	AL8	D	324	338	Right-handed alpha

There are 35 sheets in PDB entry 9RL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	52	55	first strand
Strand 2	E	26	31	parallel
Strand 3	E	2	6	parallel
Strand 4	E	75	78	parallel
Strand 5	E	118	124	parallel
Strand 6	E	186	191	parallel
Strand 7	E	263	266	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	137	138	first strand
Strand 2	E	143	144	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	194	195	first strand
Strand 2	E	240	241	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	227	230	first strand
Strand 2	E	293	296	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	273	275	first strand
Strand 2	E	236	238	anti-parallel
Strand 3	E	305	306	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	55	first strand
Strand 2	F	26	31	parallel
Strand 3	F	2	6	parallel
Strand 4	F	75	78	parallel
Strand 5	F	118	122	parallel
Strand 6	F	186	190	parallel
Strand 7	F	262	265	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	137	138	first strand
Strand 2	F	143	144	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	227	230	first strand
Strand 2	F	293	296	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	236	237	first strand
Strand 2	F	274	275	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	55	first strand
Strand 2	G	26	31	parallel
Strand 3	G	2	6	parallel
Strand 4	G	75	78	parallel
Strand 5	G	118	122	parallel
Strand 6	G	186	190	parallel
Strand 7	G	262	265	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	137	138	first strand
Strand 2	G	143	144	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	227	230	first strand
Strand 2	G	293	296	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	274	275	first strand
Strand 2	G	236	237	anti-parallel
Strand 3	G	305	306	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	52	55	first strand
Strand 2	H	26	31	parallel
Strand 3	H	2	6	parallel
Strand 4	H	75	78	parallel
Strand 5	H	118	122	parallel
Strand 6	H	186	190	parallel
Strand 7	H	262	265	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	137	138	first strand
Strand 2	H	143	144	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	227	229	first strand
Strand 2	H	293	295	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	274	275	first strand
Strand 2	H	236	237	anti-parallel
Strand 3	H	305	306	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	55	first strand
Strand 2	A	26	31	parallel
Strand 3	A	2	6	parallel
Strand 4	A	75	78	parallel
Strand 5	A	118	122	parallel
Strand 6	A	186	189	parallel
Strand 7	A	262	264	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	138	first strand
Strand 2	A	143	144	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	195	first strand
Strand 2	A	240	241	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	230	first strand
Strand 2	A	293	296	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	275	first strand
Strand 2	A	236	238	anti-parallel
Strand 3	A	305	306	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	55	first strand
Strand 2	B	26	31	parallel
Strand 3	B	2	6	parallel
Strand 4	B	75	78	parallel
Strand 5	B	118	122	parallel
Strand 6	B	186	190	parallel
Strand 7	B	263	265	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	138	first strand
Strand 2	B	143	144	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	195	first strand
Strand 2	B	240	241	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	230	first strand
Strand 2	B	293	296	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	274	275	first strand
Strand 2	B	236	237	anti-parallel
Strand 3	B	305	306	parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	55	first strand
Strand 2	C	26	31	parallel
Strand 3	C	2	6	parallel
Strand 4	C	75	78	parallel
Strand 5	C	118	122	parallel
Strand 6	C	186	191	parallel
Strand 7	C	262	266	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	138	first strand
Strand 2	C	143	144	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	228	230	first strand
Strand 2	C	294	296	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	274	275	first strand
Strand 2	C	236	237	anti-parallel
Strand 3	C	305	306	parallel

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There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	55	first strand
Strand 2	D	27	31	parallel
Strand 3	D	3	6	parallel
Strand 4	D	75	78	parallel
Strand 5	D	118	122	parallel
Strand 6	D	186	191	parallel
Strand 7	D	262	266	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	138	first strand
Strand 2	D	143	144	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	230	first strand
Strand 2	D	295	296	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	237	first strand
Strand 2	D	305	306	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RL0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RL0