Analysis of interatomic Contacts of Structural Units in PDB entry:
9RMW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RMW entry

There are 8 chains in PDB entry 9RMW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 417	ARG 846
B	VAL 417	ARG 846
E	GLY 7	LEU 218
F	GLY 7	ALA 214
G	GLY 7	LEU 218
C	VAL 417	ARG 846
D	VAL 417	ARG 846
H	GLY 7	ALA 214

There are 88 helices in PDB entry 9RMW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	439	441	Right-handed 310
Helix 2	AA2	A	445	459	Right-handed alpha
Helix 3	AA3	A	484	491	Right-handed alpha
Helix 4	AA4	A	504	509	Right-handed alpha
Helix 5	AA5	A	544	568	Right-handed alpha
Helix 6	AA6	A	594	608	Right-handed alpha
Helix 7	AA7	A	617	647	Right-handed alpha
Helix 8	AA8	A	657	663	Right-handed alpha
Helix 9	AA9	A	675	684	Right-handed alpha
Helix 10	AB1	A	686	698	Right-handed alpha
Helix 11	AB2	A	707	719	Right-handed alpha
Helix 12	AB3	A	729	732	Right-handed 310
Helix 13	AB4	A	765	778	Right-handed alpha
Helix 14	AB5	A	779	788	Right-handed alpha
Helix 15	AB6	A	810	813	Right-handed 310
Helix 16	AB7	A	814	846	Right-handed alpha
Helix 17	AB8	B	433	437	Right-handed 310
Helix 18	AB9	B	438	441	Right-handed 310
Helix 19	AC1	B	445	459	Right-handed alpha
Helix 20	AC2	B	485	492	Right-handed alpha
Helix 21	AC3	B	537	541	Right-handed 310
Helix 22	AC4	B	544	568	Right-handed alpha
Helix 23	AC5	B	594	607	Right-handed alpha
Helix 24	AC6	B	617	641	Right-handed alpha
Helix 25	AC7	B	641	647	Right-handed alpha
Helix 26	AC8	B	657	664	Right-handed alpha
Helix 27	AC9	B	678	683	Right-handed alpha
Helix 28	AD1	B	686	698	Right-handed alpha
Helix 29	AD2	B	707	718	Right-handed alpha
Helix 30	AD3	B	728	737	Right-handed alpha
Helix 31	AD4	B	765	777	Right-handed alpha
Helix 32	AD5	B	779	789	Right-handed alpha
Helix 33	AD6	B	810	813	Right-handed 310
Helix 34	AD7	B	814	846	Right-handed alpha
Helix 35	AD8	E	8	30	Right-handed alpha
Helix 36	AD9	E	96	105	Right-handed alpha
Helix 37	AE1	E	105	125	Right-handed alpha
Helix 38	AE2	E	132	161	Right-handed alpha
Helix 39	AE3	E	177	217	Right-handed alpha
Helix 40	AE4	F	8	30	Right-handed alpha
Helix 41	AE5	F	92	105	Right-handed alpha
Helix 42	AE6	F	105	129	Right-handed alpha
Helix 43	AE7	F	133	162	Right-handed alpha
Helix 44	AE8	F	177	212	Right-handed alpha
Helix 45	AE9	G	8	30	Right-handed alpha
Helix 46	AF1	G	96	105	Right-handed alpha
Helix 47	AF2	G	105	125	Right-handed alpha
Helix 48	AF3	G	132	161	Right-handed alpha
Helix 49	AF4	G	177	217	Right-handed alpha
Helix 50	AF5	C	439	441	Right-handed 310
Helix 51	AF6	C	445	459	Right-handed alpha
Helix 52	AF7	C	484	491	Right-handed alpha
Helix 53	AF8	C	504	509	Right-handed alpha
Helix 54	AF9	C	544	568	Right-handed alpha
Helix 55	AG1	C	594	608	Right-handed alpha
Helix 56	AG2	C	617	647	Right-handed alpha
Helix 57	AG3	C	657	663	Right-handed alpha
Helix 58	AG4	C	675	684	Right-handed alpha
Helix 59	AG5	C	686	698	Right-handed alpha
Helix 60	AG6	C	707	719	Right-handed alpha
Helix 61	AG7	C	729	732	Right-handed 310
Helix 62	AG8	C	765	778	Right-handed alpha
Helix 63	AG9	C	779	788	Right-handed alpha
Helix 64	AH1	C	810	813	Right-handed 310
Helix 65	AH2	C	814	846	Right-handed alpha
Helix 66	AH3	D	433	437	Right-handed 310
Helix 67	AH4	D	438	441	Right-handed 310
Helix 68	AH5	D	445	459	Right-handed alpha
Helix 69	AH6	D	485	492	Right-handed alpha
Helix 70	AH7	D	537	541	Right-handed 310
Helix 71	AH8	D	544	568	Right-handed alpha
Helix 72	AH9	D	594	607	Right-handed alpha
Helix 73	AI1	D	617	641	Right-handed alpha
Helix 74	AI2	D	641	647	Right-handed alpha
Helix 75	AI3	D	657	664	Right-handed alpha
Helix 76	AI4	D	678	683	Right-handed alpha
Helix 77	AI5	D	686	698	Right-handed alpha
Helix 78	AI6	D	707	718	Right-handed alpha
Helix 79	AI7	D	728	737	Right-handed alpha
Helix 80	AI8	D	765	777	Right-handed alpha
Helix 81	AI9	D	779	789	Right-handed alpha
Helix 82	AJ1	D	810	813	Right-handed 310
Helix 83	AJ2	D	814	846	Right-handed alpha
Helix 84	AJ3	H	8	30	Right-handed alpha
Helix 85	AJ4	H	92	105	Right-handed alpha
Helix 86	AJ5	H	105	129	Right-handed alpha
Helix 87	AJ6	H	133	162	Right-handed alpha
Helix 88	AJ7	H	177	212	Right-handed alpha

There are 26 sheets in PDB entry 9RMW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	421	first strand
Strand 2	A	463	466	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	430	first strand
Strand 2	A	443	444	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	474	475	first strand
Strand 2	A	482	483	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	498	first strand
Strand 2	A	756	757	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	519	520	first strand
Strand 2	A	752	753	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	668	671	first strand
Strand 2	A	722	727	parallel
Strand 3	A	522	527	anti-parallel
Strand 4	A	742	745	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	430	first strand
Strand 2	B	443	444	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	520	first strand
Strand 2	B	752	753	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	669	671	first strand
Strand 2	B	723	727	parallel
Strand 3	B	522	527	anti-parallel
Strand 4	B	742	745	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	61	first strand
Strand 2	E	34	38	anti-parallel
Strand 3	E	175	176	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	67	first strand
Strand 2	E	77	79	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	59	61	first strand
Strand 2	F	34	36	anti-parallel
Strand 3	F	174	176	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	67	first strand
Strand 2	F	77	79	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	61	first strand
Strand 2	G	34	38	anti-parallel
Strand 3	G	175	176	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	65	67	first strand
Strand 2	G	77	79	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	418	421	first strand
Strand 2	C	463	466	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	429	430	first strand
Strand 2	C	443	444	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	474	475	first strand
Strand 2	C	482	483	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	497	498	first strand
Strand 2	C	756	757	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	519	520	first strand
Strand 2	C	752	753	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	668	671	first strand
Strand 2	C	722	727	parallel
Strand 3	C	522	527	anti-parallel
Strand 4	C	742	745	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	429	430	first strand
Strand 2	D	443	444	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	519	520	first strand
Strand 2	D	752	753	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	669	671	first strand
Strand 2	D	723	727	parallel
Strand 3	D	522	527	anti-parallel
Strand 4	D	742	745	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	61	first strand
Strand 2	H	34	36	anti-parallel
Strand 3	H	174	176	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	65	67	first strand
Strand 2	H	77	79	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RMW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RMW