Analysis of interatomic Contacts of Structural Units in PDB entry:
9RP1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RP1 entry

There are 2 chains in PDB entry 9RP1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 16ALA 298
B
 ILE 13ALA 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 9RP1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 20Right-handed 310
Helix 2
AA2
A
21 37Right-handed alpha
Helix 3
AA3
A
47 63Right-handed alpha
Helix 4
AA4
A
64 66Right-handed 310
Helix 5
AA5
A
70 85Right-handed alpha
Helix 6
AA6
A
86 90Right-handed 310
Helix 7
AA7
A
92 112Right-handed alpha
Helix 8
AA8
A
113 117Right-handed 310
Helix 9
AA9
A
118 134Right-handed alpha
Helix 10
AB1
A
135 157Right-handed alpha
Helix 11
AB2
A
159 167Right-handed alpha
Helix 12
AB3
A
169 181Right-handed alpha
Helix 13
AB4
A
182 195Right-handed alpha
Helix 14
AB5
A
196 205Right-handed alpha
Helix 15
AB6
A
206 231Right-handed alpha
Helix 16
AB7
A
236 241Right-handed 310
Helix 17
AB8
A
245 268Right-handed alpha
Helix 18
AB9
A
271 292Right-handed alpha
Helix 19
AC1
A
293 296Right-handed 310
Helix 20
AC2
B
18 20Right-handed 310
Helix 21
AC3
B
21 37Right-handed alpha
Helix 22
AC4
B
47 63Right-handed alpha
Helix 23
AC5
B
64 66Right-handed 310
Helix 24
AC6
B
70 85Right-handed alpha
Helix 25
AC7
B
92 111Right-handed alpha
Helix 26
AC8
B
113 117Right-handed 310
Helix 27
AC9
B
118 134Right-handed alpha
Helix 28
AD1
B
135 156Right-handed alpha
Helix 29
AD2
B
159 168Right-handed alpha
Helix 30
AD3
B
169 181Right-handed alpha
Helix 31
AD4
B
182 195Right-handed alpha
Helix 32
AD5
B
196 206Right-handed alpha
Helix 33
AD6
B
206 231Right-handed alpha
Helix 34
AD7
B
236 241Right-handed 310
Helix 35
AD8
B
245 268Right-handed alpha
Helix 36
AD9
B
271 290Right-handed alpha
Helix 37
AE1
B
291 296Right-handed 310
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There are no sheets in PDB entry 9RP1
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