Analysis of interatomic Contacts of Structural Units in PDB entry:
9RPM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RPM entry

There is 1 chain in PDB entry 9RPM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2THR 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9RPM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 50Right-handed alpha
Helix 2
AA2
A
64 68Right-handed 310
Helix 3
AA3
A
74 86Right-handed alpha
Helix 4
AA4
A
96 101Right-handed alpha
Helix 5
AA5
A
106 121Right-handed alpha
Helix 6
AA6
A
125 127Right-handed 310
Helix 7
AA7
A
137 142Right-handed alpha
Helix 8
AA8
A
150 161Right-handed alpha
Helix 9
AA9
A
174 178Right-handed alpha
Helix 10
AB1
A
202 212Right-handed alpha
Helix 11
AB2
A
221 231Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9RPM.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
54 62parallel
Strand 3
A
21 28parallel
Strand 4
A
129 136parallel
Strand 5
A
163 167parallel
Strand 6
A
190 194parallel
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