Analysis of interatomic Contacts of Structural Units in PDB entry:
9RQM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RQM entry

There are 2 chains in PDB entry 9RQM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 21ASN 706
B
 ALA 4ILE 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9RQM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 42Right-handed alpha
Helix 2
AA2
A
55 63Right-handed alpha
Helix 3
AA3
A
71 85Right-handed alpha
Helix 4
AA4
A
89 118Right-handed alpha
Helix 5
AA5
A
119 132Right-handed alpha
Helix 6
AA6
A
133 142Right-handed alpha
Helix 7
AA7
A
145 165Right-handed alpha
Helix 8
AA8
A
168 187Right-handed alpha
Helix 9
AA9
A
188 189Right-handed 310
Helix 10
AB1
A
190 192Right-handed 310
Helix 11
AB2
A
193 212Right-handed alpha
Helix 12
AB3
A
215 229Right-handed alpha
Helix 13
AB4
A
230 233Right-handed 310
Helix 14
AB5
A
234 243Right-handed alpha
Helix 15
AB6
A
254 263Right-handed alpha
Helix 16
AB7
A
280 296Right-handed alpha
Helix 17
AB8
A
297 310Right-handed alpha
Helix 18
AB9
A
319 340Right-handed alpha
Helix 19
AC1
A
346 354Right-handed alpha
Helix 20
AC2
A
357 384Right-handed alpha
Helix 21
AC3
A
388 412Right-handed alpha
Helix 22
AC4
A
417 429Right-handed alpha
Helix 23
AC5
A
440 453Right-handed alpha
Helix 24
AC6
A
465 469Right-handed alpha
Helix 25
AC7
A
472 478Right-handed alpha
Helix 26
AC8
A
506 514Right-handed alpha
Helix 27
AC9
A
530 534Right-handed 310
Helix 28
AD1
A
555 563Right-handed alpha
Helix 29
AD2
A
580 592Right-handed alpha
Helix 30
AD3
A
594 606Right-handed alpha
Helix 31
AD4
A
610 632Right-handed alpha
Helix 32
AD5
A
637 654Right-handed alpha
Helix 33
AD6
A
660 678Right-handed alpha
Helix 34
AD7
A
683 705Right-handed alpha
Helix 35
AD8
B
7 11Right-handed 310
Helix 36
AD9
B
17 21Right-handed 310
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There are 2 sheets in PDB entry 9RQM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 464first strand
Strand 2
A
434 438parallel
Strand 3
A
518 522parallel
Strand 4
A
544 549anti-parallel
Strand 5
A
536 541anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 491first strand
Strand 2
A
504 505parallel
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