Analysis of interatomic Contacts of Structural Units in PDB entry:
9RRT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RRT entry

There are 2 chains in PDB entry 9RRT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 39GLU 345
B
 SER 42SER 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9RRT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 65Right-handed alpha
Helix 2
AA2
A
81 110Right-handed alpha
Helix 3
AA3
A
119 146Right-handed alpha
Helix 4
AA4
A
167 188Right-handed alpha
Helix 5
AA5
A
206 211Right-handed alpha
Helix 6
AA6
A
219 229Right-handed alpha
Helix 7
AA7
A
232 242Right-handed alpha
Helix 8
AA8
A
256 263Right-handed alpha
Helix 9
AA9
A
274 288Right-handed alpha
Helix 10
AB1
A
300 341Right-handed alpha
Helix 11
AB2
B
43 65Right-handed alpha
Helix 12
AB3
B
81 112Right-handed alpha
Helix 13
AB4
B
119 146Right-handed alpha
Helix 14
AB5
B
167 188Right-handed alpha
Helix 15
AB6
B
206 211Right-handed alpha
Helix 16
AB7
B
219 231Right-handed alpha
Helix 17
AB8
B
232 242Right-handed alpha
Helix 18
AB9
B
256 263Right-handed alpha
Helix 19
AC1
B
274 288Right-handed alpha
Helix 20
AC2
B
300 340Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9RRT.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
342 343anti-parallel
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