Analysis of interatomic Contacts of Structural Units in PDB entry:
9RS9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RS9 entry

There are 3 chains in PDB entry 9RS9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8LEU 418
B
 GLY 302THR 926
C
 ASP 5ALA 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 9RS9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 56Right-handed alpha
Helix 2
AA2
A
91 110Right-handed alpha
Helix 3
AA3
A
120 129Right-handed alpha
Helix 4
AA4
A
131 140Right-handed alpha
Helix 5
AA5
A
145 150Right-handed alpha
Helix 6
AA6
A
160 175Right-handed alpha
Helix 7
AA7
A
191 196Right-handed alpha
Helix 8
AA8
A
198 212Right-handed alpha
Helix 9
AA9
A
264 269Right-handed alpha
Helix 10
AB1
A
271 278Right-handed alpha
Helix 11
AB2
A
322 342Right-handed alpha
Helix 12
AB3
A
402 415Right-handed alpha
Helix 13
AB4
A
416 418Right-handed 310
Helix 14
AB5
B
322 326Right-handed alpha
Helix 15
AB6
B
337 358Right-handed alpha
Helix 16
AB7
B
396 415Right-handed alpha
Helix 17
AB8
B
417 424Right-handed alpha
Helix 18
AB9
B
427 444Right-handed alpha
Helix 19
AC1
B
458 468Right-handed alpha
Helix 20
AC2
B
479 495Right-handed alpha
Helix 21
AC3
B
531 545Right-handed alpha
Helix 22
AC4
B
625 636Right-handed alpha
Helix 23
AC5
B
638 647Right-handed alpha
Helix 24
AC6
B
816 822Right-handed alpha
Helix 25
AC7
B
828 857Right-handed alpha
Helix 26
AC8
C
21 30Right-handed alpha
Helix 27
AC9
C
35 39Right-handed 310
Helix 28
AD1
C
72 80Right-handed alpha
Helix 29
AD2
C
94 111Right-handed alpha
Helix 30
AD3
C
132 143Right-handed alpha
Helix 31
AD4
C
158 177Right-handed alpha
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There are 7 sheets in PDB entry 9RS9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
10 16anti-parallel
Strand 3
A
79 85anti-parallel
Strand 4
A
69 75anti-parallel
Strand 5
A
58 65anti-parallel
Strand 6
B
362 369anti-parallel
Strand 7
B
372 380anti-parallel
Strand 8
B
384 391anti-parallel
Strand 9
B
308 313anti-parallel
Strand 10
B
327 331anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
308 312parallel
Strand 3
A
296 303anti-parallel
Strand 4
A
390 394anti-parallel
Strand 5
A
378 384anti-parallel
Strand 6
A
363 369anti-parallel
Strand 7
B
878 881anti-parallel
Strand 8
B
904 909anti-parallel
Strand 9
B
915 921anti-parallel
Strand 10
B
799 802anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
308 312parallel
Strand 3
A
296 303anti-parallel
Strand 4
A
390 394anti-parallel
Strand 5
A
378 384anti-parallel
Strand 6
A
363 369anti-parallel
Strand 7
B
878 881anti-parallel
Strand 8
B
904 909anti-parallel
Strand 9
B
915 921anti-parallel
Strand 10
B
805 806anti-parallel
Strand 11
B
811 812anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 190first strand
Strand 2
A
178 183anti-parallel
Strand 3
A
244 250anti-parallel
Strand 4
A
232 241anti-parallel
Strand 5
A
217 223anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
524 528first strand
Strand 2
B
514 521anti-parallel
Strand 3
B
599 605anti-parallel
Strand 4
B
590 596anti-parallel
Strand 5
B
559 564anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 48first strand
Strand 2
C
60 65anti-parallel
Strand 3
C
10 15parallel
Strand 4
C
84 90parallel
Strand 5
C
117 121parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 53first strand
Strand 2
C
56 58anti-parallel
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