Analysis of interatomic Contacts of Structural Units in PDB entry:
9RSL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RSL entry

There are 2 chains in PDB entry 9RSL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 39ALA 439
B
 LYS 40ALA 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9RSL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 75Right-handed alpha
Helix 2
AA2
A
89 101Right-handed alpha
Helix 3
AA3
A
110 120Right-handed alpha
Helix 4
AA4
A
126 130Right-handed 310
Helix 5
AA5
A
131 139Right-handed alpha
Helix 6
AA6
A
140 147Right-handed alpha
Helix 7
AA7
A
169 175Right-handed alpha
Helix 8
AA8
A
177 181Right-handed 310
Helix 9
AA9
A
186 200Right-handed alpha
Helix 10
AB1
A
215 226Right-handed alpha
Helix 11
AB2
A
242 258Right-handed alpha
Helix 12
AB3
A
268 278Right-handed alpha
Helix 13
AB4
A
290 295Right-handed alpha
Helix 14
AB5
A
295 303Right-handed alpha
Helix 15
AB6
A
334 351Right-handed alpha
Helix 16
AB7
A
353 362Right-handed alpha
Helix 17
AB8
A
368 372Right-handed 310
Helix 18
AB9
A
377 386Right-handed alpha
Helix 19
AC1
A
387 390Right-handed 310
Helix 20
AC2
A
399 416Right-handed alpha
Helix 21
AC3
A
420 439Right-handed alpha
Helix 22
AC4
B
61 75Right-handed alpha
Helix 23
AC5
B
89 100Right-handed alpha
Helix 24
AC6
B
110 120Right-handed alpha
Helix 25
AC7
B
126 130Right-handed 310
Helix 26
AC8
B
131 139Right-handed alpha
Helix 27
AC9
B
140 147Right-handed alpha
Helix 28
AD1
B
169 175Right-handed alpha
Helix 29
AD2
B
177 181Right-handed 310
Helix 30
AD3
B
186 200Right-handed alpha
Helix 31
AD4
B
215 226Right-handed alpha
Helix 32
AD5
B
242 258Right-handed alpha
Helix 33
AD6
B
268 278Right-handed alpha
Helix 34
AD7
B
290 295Right-handed alpha
Helix 35
AD8
B
295 303Right-handed alpha
Helix 36
AD9
B
334 351Right-handed alpha
Helix 37
AE1
B
353 362Right-handed alpha
Helix 38
AE2
B
368 372Right-handed 310
Helix 39
AE3
B
377 386Right-handed alpha
Helix 40
AE4
B
387 390Right-handed 310
Helix 41
AE5
B
399 416Right-handed alpha
Helix 42
AE6
B
420 439Right-handed alpha
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There are 8 sheets in PDB entry 9RSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 84first strand
Strand 2
A
41 47parallel
Strand 3
A
106 109parallel
Strand 4
A
322 329anti-parallel
Strand 5
A
156 162anti-parallel
Strand 6
A
365 366anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
152 153anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 287first strand
Strand 2
A
164 168anti-parallel
Strand 3
A
306 309anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
262 264parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 84first strand
Strand 2
B
41 47parallel
Strand 3
B
106 109parallel
Strand 4
B
322 329anti-parallel
Strand 5
B
156 162anti-parallel
Strand 6
B
365 366anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 149first strand
Strand 2
B
152 153anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
283 287first strand
Strand 2
B
164 168anti-parallel
Strand 3
B
306 309anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 208first strand
Strand 2
B
262 264parallel
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