Analysis of interatomic Contacts of Structural Units in PDB entry:
9RTG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RTG entry

There are 14 chains in PDB entry 9RTG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 1	CYS 216
B	GLN 1	CYS 227
C	GLU 1	CYS 216
D	GLN 1	CYS 227
E	GLU 1	CYS 216
F	GLN 1	CYS 227
G	GLU 1	CYS 216
H	GLN 1	CYS 227
I	GLU 1	CYS 216
J	GLN 1	CYS 227
K	GLU 1	CYS 216
L	GLN 1	CYS 227
X	ASP 42	PRO 67
M	ASP 42	PRO 67

There are 51 helices in PDB entry 9RTG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	80	84	Right-handed 310
Helix 2	AA2	A	123	128	Right-handed alpha
Helix 3	AA3	A	185	190	Right-handed alpha
Helix 4	AA4	B	28	32	Right-handed 310
Helix 5	AA5	B	62	65	Right-handed 310
Helix 6	AA6	B	87	91	Right-handed 310
Helix 7	AA7	B	167	169	Right-handed 310
Helix 8	AA8	B	198	200	Right-handed 310
Helix 9	AA9	B	212	215	Right-handed 310
Helix 10	AB1	C	80	84	Right-handed 310
Helix 11	AB2	C	123	128	Right-handed alpha
Helix 12	AB3	C	185	190	Right-handed alpha
Helix 13	AB4	D	28	32	Right-handed 310
Helix 14	AB5	D	62	65	Right-handed 310
Helix 15	AB6	D	87	91	Right-handed 310
Helix 16	AB7	D	167	169	Right-handed 310
Helix 17	AB8	D	198	200	Right-handed 310
Helix 18	AB9	D	212	215	Right-handed 310
Helix 19	AC1	E	51	53	Right-handed 310
Helix 20	AC2	E	80	84	Right-handed 310
Helix 21	AC3	E	123	128	Right-handed alpha
Helix 22	AC4	E	184	190	Right-handed alpha
Helix 23	AC5	F	28	32	Right-handed 310
Helix 24	AC6	F	62	65	Right-handed 310
Helix 25	AC7	F	74	76	Right-handed 310
Helix 26	AC8	F	87	91	Right-handed 310
Helix 27	AC9	F	167	169	Right-handed 310
Helix 28	AD1	F	198	200	Right-handed 310
Helix 29	AD2	F	212	215	Right-handed 310
Helix 30	AD3	G	51	53	Right-handed 310
Helix 31	AD4	G	80	84	Right-handed 310
Helix 32	AD5	G	123	128	Right-handed alpha
Helix 33	AD6	G	185	190	Right-handed alpha
Helix 34	AD7	H	28	32	Right-handed 310
Helix 35	AD8	H	62	65	Right-handed 310
Helix 36	AD9	H	87	91	Right-handed 310
Helix 37	AE1	H	196	200	Right-handed 310
Helix 38	AE2	H	213	215	Right-handed 310
Helix 39	AE3	I	80	84	Right-handed 310
Helix 40	AE4	I	123	128	Right-handed alpha
Helix 41	AE5	I	185	189	Right-handed alpha
Helix 42	AE6	J	28	32	Right-handed 310
Helix 43	AE7	J	62	65	Right-handed 310
Helix 44	AE8	J	87	91	Right-handed 310
Helix 45	AE9	J	212	215	Right-handed 310
Helix 46	AF1	K	80	84	Right-handed 310
Helix 47	AF2	K	123	128	Right-handed alpha
Helix 48	AF3	K	185	190	Right-handed alpha
Helix 49	AF4	L	28	32	Right-handed 310
Helix 50	AF5	L	62	65	Right-handed 310
Helix 51	AF6	L	212	215	Right-handed 310

There are 57 sheets in PDB entry 9RTG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	5	first strand
Strand 2	A	19	29	anti-parallel
Strand 3	A	63	76	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	104	108	parallel
Strand 3	A	86	91	anti-parallel
Strand 4	A	34	39	anti-parallel
Strand 5	A	46	50	anti-parallel
Strand 6	A	54	55	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	120	first strand
Strand 2	A	131	141	anti-parallel
Strand 3	A	175	184	anti-parallel
Strand 4	A	161	165	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	156	first strand
Strand 2	A	147	152	anti-parallel
Strand 3	A	193	199	anti-parallel
Strand 4	A	207	212	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	68	73	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	12	first strand
Strand 2	B	118	122	parallel
Strand 3	B	92	97	anti-parallel
Strand 4	B	34	39	anti-parallel
Strand 5	B	46	51	anti-parallel
Strand 6	B	58	60	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	135	first strand
Strand 2	B	146	156	anti-parallel
Strand 3	B	187	196	anti-parallel
Strand 4	B	174	176	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	135	first strand
Strand 2	B	146	156	anti-parallel
Strand 3	B	187	196	anti-parallel
Strand 4	B	180	181	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	165	first strand
Strand 2	B	206	211	anti-parallel
Strand 3	B	216	221	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	19	29	anti-parallel
Strand 3	C	63	76	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	104	107	parallel
Strand 3	C	86	91	anti-parallel
Strand 4	C	34	39	anti-parallel
Strand 5	C	46	50	anti-parallel
Strand 6	C	54	55	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	120	first strand
Strand 2	C	131	141	anti-parallel
Strand 3	C	175	184	anti-parallel
Strand 4	C	161	165	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	156	first strand
Strand 2	C	147	152	anti-parallel
Strand 3	C	193	199	anti-parallel
Strand 4	C	207	212	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	118	122	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	58	60	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	118	122	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	111	114	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	135	first strand
Strand 2	D	146	156	anti-parallel
Strand 3	D	187	196	anti-parallel
Strand 4	D	174	176	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	135	first strand
Strand 2	D	146	156	anti-parallel
Strand 3	D	187	196	anti-parallel
Strand 4	D	180	181	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	164	165	first strand
Strand 2	D	206	211	anti-parallel
Strand 3	D	216	221	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	19	25	anti-parallel
Strand 3	E	71	76	anti-parallel
Strand 4	E	63	68	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	104	108	parallel
Strand 3	E	86	91	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	45	50	anti-parallel
Strand 6	E	54	55	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	116	120	first strand
Strand 2	E	134	141	anti-parallel
Strand 3	E	175	181	anti-parallel
Strand 4	E	161	165	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	151	first strand
Strand 2	E	193	200	anti-parallel
Strand 3	E	207	212	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	18	25	anti-parallel
Strand 3	F	78	83	anti-parallel
Strand 4	F	68	73	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	12	first strand
Strand 2	F	118	122	parallel
Strand 3	F	92	99	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	58	60	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	12	first strand
Strand 2	F	118	122	parallel
Strand 3	F	92	99	anti-parallel
Strand 4	F	111	114	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	131	135	first strand
Strand 2	F	146	156	anti-parallel
Strand 3	F	187	196	anti-parallel
Strand 4	F	174	176	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	131	135	first strand
Strand 2	F	146	156	anti-parallel
Strand 3	F	187	196	anti-parallel
Strand 4	F	180	181	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	162	165	first strand
Strand 2	F	206	211	anti-parallel
Strand 3	F	216	221	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	19	29	anti-parallel
Strand 3	G	63	76	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	104	108	parallel
Strand 3	G	86	91	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	46	50	anti-parallel
Strand 6	G	54	55	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	116	120	first strand
Strand 2	G	131	141	anti-parallel
Strand 3	G	175	184	anti-parallel
Strand 4	G	161	165	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	155	157	first strand
Strand 2	G	146	152	anti-parallel
Strand 3	G	193	200	anti-parallel
Strand 4	G	207	212	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	118	122	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	118	122	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	111	114	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	131	135	first strand
Strand 2	H	148	156	anti-parallel
Strand 3	H	187	194	anti-parallel
Strand 4	H	174	176	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	131	135	first strand
Strand 2	H	148	156	anti-parallel
Strand 3	H	187	194	anti-parallel
Strand 4	H	180	181	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	161	165	first strand
Strand 2	H	206	211	anti-parallel
Strand 3	H	217	221	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	7	first strand
Strand 2	I	19	29	anti-parallel
Strand 3	I	63	76	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	10	13	first strand
Strand 2	I	104	108	parallel
Strand 3	I	86	91	anti-parallel
Strand 4	I	34	39	anti-parallel
Strand 5	I	46	50	anti-parallel
Strand 6	I	54	55	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	116	120	first strand
Strand 2	I	131	141	anti-parallel
Strand 3	I	175	184	anti-parallel
Strand 4	I	161	165	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	155	157	first strand
Strand 2	I	146	152	anti-parallel
Strand 3	I	193	200	anti-parallel
Strand 4	I	207	212	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	7	first strand
Strand 2	J	17	25	anti-parallel
Strand 3	J	78	84	anti-parallel
Strand 4	J	68	73	anti-parallel

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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	118	122	parallel
Strand 3	J	92	97	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	46	51	anti-parallel
Strand 6	J	58	60	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	131	135	first strand
Strand 2	J	148	156	anti-parallel
Strand 3	J	187	194	anti-parallel
Strand 4	J	174	176	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	131	135	first strand
Strand 2	J	148	156	anti-parallel
Strand 3	J	187	194	anti-parallel
Strand 4	J	180	181	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	162	165	first strand
Strand 2	J	205	211	anti-parallel
Strand 3	J	216	222	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	7	first strand
Strand 2	K	19	25	anti-parallel
Strand 3	K	71	76	anti-parallel
Strand 4	K	63	68	anti-parallel

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There are 6 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	13	first strand
Strand 2	K	104	108	parallel
Strand 3	K	86	91	anti-parallel
Strand 4	K	34	39	anti-parallel
Strand 5	K	45	50	anti-parallel
Strand 6	K	54	55	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	116	120	first strand
Strand 2	K	131	141	anti-parallel
Strand 3	K	175	184	anti-parallel
Strand 4	K	161	165	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	146	152	first strand
Strand 2	K	193	200	anti-parallel
Strand 3	K	207	212	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3	7	first strand
Strand 2	L	18	25	anti-parallel
Strand 3	L	78	83	anti-parallel
Strand 4	L	68	73	anti-parallel

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There are 6 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	12	first strand
Strand 2	L	118	122	parallel
Strand 3	L	92	99	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	46	51	anti-parallel
Strand 6	L	58	60	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	12	first strand
Strand 2	L	118	122	parallel
Strand 3	L	92	99	anti-parallel
Strand 4	L	111	114	anti-parallel

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There are 4 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	131	132	first strand
Strand 2	L	152	156	anti-parallel
Strand 3	L	187	190	anti-parallel
Strand 4	L	180	181	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	162	165	first strand
Strand 2	L	206	211	anti-parallel
Strand 3	L	216	221	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 9RTG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RTG