Analysis of interatomic Contacts of Structural Units in PDB entry:
9RW7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RW7 entry

There are 6 chains in PDB entry 9RW7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 695	ARG 747
B	CYS 695	ARG 747
C	GLU 5	CYS 167
D	MET 4	ALA 816
E	A 1	U 57
F	A 1	U 57

There are 41 helices in PDB entry 9RW7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	695	747	Right-handed alpha
Helix 2	AA2	B	696	747	Right-handed alpha
Helix 3	AA3	C	6	25	Right-handed alpha
Helix 4	AA4	C	30	35	Right-handed alpha
Helix 5	AA5	C	36	39	Right-handed 310
Helix 6	AA6	C	43	51	Right-handed alpha
Helix 7	AA7	C	53	62	Right-handed alpha
Helix 8	AA8	C	95	110	Right-handed alpha
Helix 9	AA9	C	119	125	Right-handed alpha
Helix 10	AB1	C	126	128	Right-handed 310
Helix 11	AB2	C	130	137	Right-handed alpha
Helix 12	AB3	C	140	150	Right-handed alpha
Helix 13	AB4	D	5	25	Right-handed alpha
Helix 14	AB5	D	30	35	Right-handed alpha
Helix 15	AB6	D	36	39	Right-handed 310
Helix 16	AB7	D	43	50	Right-handed alpha
Helix 17	AB8	D	53	62	Right-handed alpha
Helix 18	AB9	D	95	111	Right-handed alpha
Helix 19	AC1	D	119	123	Right-handed alpha
Helix 20	AC2	D	124	128	Right-handed 310
Helix 21	AC3	D	130	137	Right-handed alpha
Helix 22	AC4	D	140	152	Right-handed alpha
Helix 23	AC5	D	521	529	Right-handed alpha
Helix 24	AC6	D	535	554	Right-handed alpha
Helix 25	AC7	D	594	600	Right-handed alpha
Helix 26	AC8	D	601	608	Right-handed alpha
Helix 27	AC9	D	617	630	Right-handed alpha
Helix 28	AD1	D	639	652	Right-handed alpha
Helix 29	AD2	D	662	670	Right-handed alpha
Helix 30	AD3	D	675	680	Right-handed 310
Helix 31	AD4	D	681	688	Right-handed alpha
Helix 32	AD5	D	689	694	Right-handed 310
Helix 33	AD6	D	698	714	Right-handed alpha
Helix 34	AD7	D	717	725	Right-handed alpha
Helix 35	AD8	D	726	728	Right-handed 310
Helix 36	AD9	D	729	743	Right-handed alpha
Helix 37	AE1	D	746	773	Right-handed alpha
Helix 38	AE2	D	780	787	Right-handed alpha
Helix 39	AE3	D	788	790	Right-handed 310
Helix 40	AE4	D	793	801	Right-handed alpha
Helix 41	AE5	D	803	816	Right-handed alpha

There are 5 sheets in PDB entry 9RW7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	29	first strand
Strand 2	C	74	76	anti-parallel
Strand 3	C	69	71	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	118	first strand
Strand 2	C	161	164	anti-parallel
Strand 3	C	155	158	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	74	77	anti-parallel
Strand 3	D	68	71	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	118	first strand
Strand 2	D	161	164	anti-parallel
Strand 3	D	155	158	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	530	533	first strand
Strand 2	D	585	589	parallel
Strand 3	D	572	580	anti-parallel
Strand 4	D	557	565	anti-parallel
Strand 5	D	612	615	parallel
Strand 6	D	636	638	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RW7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RW7