Analysis of interatomic Contacts of Structural Units in PDB entry:
9RW9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RW9 entry

There are 6 chains in PDB entry 9RW9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 695	ARG 747
B	CYS 695	ARG 747
C	GLU 5	ALA 816
D	GLU 2	ALA 816
E	A 1	U 57
F	A 1	U 57

There are 59 helices in PDB entry 9RW9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	695	746	Right-handed alpha
Helix 2	AA2	B	696	747	Right-handed alpha
Helix 3	AA3	C	6	25	Right-handed alpha
Helix 4	AA4	C	30	37	Right-handed alpha
Helix 5	AA5	C	43	51	Right-handed alpha
Helix 6	AA6	C	53	63	Right-handed alpha
Helix 7	AA7	C	95	112	Right-handed alpha
Helix 8	AA8	C	119	126	Right-handed alpha
Helix 9	AA9	C	130	138	Right-handed alpha
Helix 10	AB1	C	140	151	Right-handed alpha
Helix 11	AB2	C	521	525	Right-handed alpha
Helix 12	AB3	C	526	530	Right-handed 310
Helix 13	AB4	C	535	554	Right-handed alpha
Helix 14	AB5	C	590	593	Right-handed 310
Helix 15	AB6	C	594	599	Right-handed alpha
Helix 16	AB7	C	601	608	Right-handed alpha
Helix 17	AB8	C	620	622	Right-handed 310
Helix 18	AB9	C	623	630	Right-handed alpha
Helix 19	AC1	C	639	652	Right-handed alpha
Helix 20	AC2	C	662	670	Right-handed alpha
Helix 21	AC3	C	675	680	Right-handed 310
Helix 22	AC4	C	681	686	Right-handed alpha
Helix 23	AC5	C	690	694	Right-handed 310
Helix 24	AC6	C	698	713	Right-handed alpha
Helix 25	AC7	C	717	725	Right-handed alpha
Helix 26	AC8	C	726	728	Right-handed 310
Helix 27	AC9	C	729	746	Right-handed alpha
Helix 28	AD1	C	746	773	Right-handed alpha
Helix 29	AD2	C	782	789	Right-handed 310
Helix 30	AD3	C	793	802	Right-handed alpha
Helix 31	AD4	C	803	816	Right-handed alpha
Helix 32	AD5	D	3	25	Right-handed alpha
Helix 33	AD6	D	30	36	Right-handed alpha
Helix 34	AD7	D	37	39	Right-handed 310
Helix 35	AD8	D	43	50	Right-handed alpha
Helix 36	AD9	D	53	63	Right-handed alpha
Helix 37	AE1	D	95	112	Right-handed alpha
Helix 38	AE2	D	119	123	Right-handed alpha
Helix 39	AE3	D	124	129	Right-handed 310
Helix 40	AE4	D	130	138	Right-handed alpha
Helix 41	AE5	D	140	152	Right-handed alpha
Helix 42	AE6	D	521	529	Right-handed alpha
Helix 43	AE7	D	535	554	Right-handed alpha
Helix 44	AE8	D	594	600	Right-handed alpha
Helix 45	AE9	D	601	608	Right-handed alpha
Helix 46	AF1	D	618	630	Right-handed alpha
Helix 47	AF2	D	639	652	Right-handed alpha
Helix 48	AF3	D	654	658	Right-handed 310
Helix 49	AF4	D	662	670	Right-handed alpha
Helix 50	AF5	D	677	688	Right-handed alpha
Helix 51	AF6	D	690	694	Right-handed 310
Helix 52	AF7	D	698	714	Right-handed alpha
Helix 53	AF8	D	717	725	Right-handed alpha
Helix 54	AF9	D	726	743	Right-handed alpha
Helix 55	AG1	D	746	773	Right-handed alpha
Helix 56	AG2	D	780	787	Right-handed alpha
Helix 57	AG3	D	788	790	Right-handed 310
Helix 58	AG4	D	793	801	Right-handed alpha
Helix 59	AG5	D	803	816	Right-handed alpha

There are 6 sheets in PDB entry 9RW9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	29	first strand
Strand 2	C	74	76	anti-parallel
Strand 3	C	69	71	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	118	first strand
Strand 2	C	161	164	anti-parallel
Strand 3	C	155	158	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	532	533	first strand
Strand 2	C	584	588	parallel
Strand 3	C	572	580	anti-parallel
Strand 4	C	558	565	anti-parallel
Strand 5	C	613	615	parallel
Strand 6	C	636	638	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	29	first strand
Strand 2	D	74	77	anti-parallel
Strand 3	D	68	71	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	118	first strand
Strand 2	D	161	164	anti-parallel
Strand 3	D	155	158	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	530	533	first strand
Strand 2	D	585	588	parallel
Strand 3	D	576	580	anti-parallel
Strand 4	D	557	561	anti-parallel
Strand 5	D	612	615	parallel
Strand 6	D	636	638	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RW9

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RW9